CCLE Explorer

The Cancer Cell Line Encyclopedia (CCLE) Explorer enables users to browse relative mRNA expression data for cancer cell lines from the CCLE by tissue of origin using Clustergrammer. Click on a tissue type to view a clustergram of gene expression data from the selected tissue type.

The size of the rectangle indicates the number of cell lines that are available for a tissue-type in the CCLE. The CCLE gene expression data has been Z-score normalized and each tissue subtype clustergram will display the top 500 genes with the most differential expression in the tissue group.