Name

Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq Dataset

From Allen Brain Atlas

mRNA expression profiles for human brain tissue samples spanning 31 time points and 26 brain structures

CHEA Transcription Factor Binding Site Profiles Dataset

From ChIP-X Enrichment Analysis

transcription factor binding site profiles from published ChIP-chip, ChIP-seq, and other transcription factor functional studies

CHEA Transcription Factor Targets Dataset

From ChIP-X Enrichment Analysis

target genes of transcription factors from published ChIP-chip, ChIP-seq, and other transcription factor binding site profiling studies

ENCODE Transcription Factor Binding Site Profiles Dataset

From Encyclopedia of DNA Elements

transcription factor binding site profiles for cell lines

ENCODE Transcription Factor Targets Dataset

From Encyclopedia of DNA Elements

target genes of transcription factors from transcription factor binding site profiles

GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations Dataset

From Gene Expression Omnibus

mRNA expression profiles for cell lines or tissues following transcription factor perturbation (inhibition, activation, knockdown, knockout, over-expression, mutation)

JASPAR Predicted Transcription Factor Targets Dataset

From Jaspar PWMs

target genes of transcription factors predicted using known transcription factor binding site motifs

MotifMap Predicted Transcription Factor Targets Dataset

From MotifMap

target genes of transcription factors predicted using known transcription factor binding site motifs

TRANSFAC Curated Transcription Factor Targets Dataset

From TRANSFAC

target genes of transcription factors manually curated from low-throughput or high-throughput transcription factor functional studies

TRANSFAC Predicted Transcription Factor Targets Dataset

From TRANSFAC

target genes of transcription factors predicted using known transcription factor binding site motifs