xy body Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery. (Gene Ontology, GO_0001741)
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Genes

94 proteins co-occuring with the xy body cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SYCP1 synaptonemal complex protein 1 1.37188
H2AFX H2A histone family, member X 1.27239
SYCP3 synaptonemal complex protein 3 1.26022
DMRTB1 DMRT-like family B with proline-rich C-terminal, 1 1.20653
BRCA1 breast cancer 1, early onset 1.08019
ANKRD17 ankyrin repeat domain 17 1.06347
STRA8 stimulated by retinoic acid 8 1.05741
SPEM1 spermatid maturation 1 1.03629
SETX senataxin 1.03428
SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 1.003
RANBP17 RAN binding protein 17 0.959748
SCMH1 sex comb on midleg homolog 1 (Drosophila) 0.956395
SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 0.954005
MLH1 mutL homolog 1 0.952096
TRIM27 tripartite motif containing 27 0.929363
TOPBP1 topoisomerase (DNA) II binding protein 1 0.923728
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 0.889321
UBE2A ubiquitin-conjugating enzyme E2A 0.870885
PHC2 polyhomeotic homolog 2 (Drosophila) 0.848369
RAD51 RAD51 recombinase 0.818993
H2AFY H2A histone family, member Y 0.797436
SPO11 SPO11 meiotic protein covalently bound to DSB 0.764982
DAZAP1 DAZ associated protein 1 0.754983
ZMIZ1 zinc finger, MIZ-type containing 1 0.723919
MAEL maelstrom spermatogenic transposon silencer 0.71946
SYCE2 synaptonemal complex central element protein 2 0.715902
PRDM9 PR domain containing 9 0.682027
CBX3 chromobox homolog 3 0.675499
CBX2 chromobox homolog 2 0.638434
TRIM9 tripartite motif containing 9 0.634159
UXT ubiquitously-expressed, prefoldin-like chaperone 0.627335
HTR1F 5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled 0.620954
ANAPC10 anaphase promoting complex subunit 10 0.613742
SIN3B SIN3 transcription regulator family member B 0.606973
UBE2B ubiquitin-conjugating enzyme E2B 0.606128
MDC1 mediator of DNA-damage checkpoint 1 0.589295
PHC1 polyhomeotic homolog 1 (Drosophila) 0.584686
CHD4 chromodomain helicase DNA binding protein 4 0.564262
MLH3 mutL homolog 3 0.550599
UBE2H ubiquitin-conjugating enzyme E2H 0.544
HIST1H1T histone cluster 1, H1t 0.51327
CBX5 chromobox homolog 5 0.499853
SMC6 structural maintenance of chromosomes 6 0.497015
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.494585
PIAS2 protein inhibitor of activated STAT, 2 0.492561
CHD3 chromodomain helicase DNA binding protein 3 0.484483
DNMT3L DNA (cytosine-5-)-methyltransferase 3-like 0.482064
STAG3 stromal antigen 3 0.462398
PCGF2 polycomb group ring finger 2 0.448848
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.442104
DMRT1 doublesex and mab-3 related transcription factor 1 0.439333
FKBP6 FK506 binding protein 6, 36kDa 0.434985
PIAS3 protein inhibitor of activated STAT, 3 0.434196
UBE2I ubiquitin-conjugating enzyme E2I 0.417294
SMC5 structural maintenance of chromosomes 5 0.405971
MSH4 mutS homolog 4 0.397035
STXBP3 syntaxin binding protein 3 0.376202
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 0.366241
PIAS1 protein inhibitor of activated STAT, 1 0.364331
RNF8 ring finger protein 8, E3 ubiquitin protein ligase 0.358228
HIST2H2AC histone cluster 2, H2ac 0.304771
HIST2H2AA4 histone cluster 2, H2aa4 0.304771
HIST2H2AA3 histone cluster 2, H2aa3 0.304771
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.29994
H3F3A H3 histone, family 3A 0.296601
H3F3B H3 histone, family 3B (H3.3B) 0.296601
UBE2N ubiquitin-conjugating enzyme E2N 0.294007
RAD9A RAD9 homolog A (S. pombe) 0.291047
RAD18 RAD18 E3 ubiquitin protein ligase 0.278509
CFB complement factor B 0.268603
SUMO1 small ubiquitin-like modifier 1 0.239916
SUMO3 small ubiquitin-like modifier 3 0.232386
SUMO2 small ubiquitin-like modifier 2 0.217511
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 0.196999
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) 0.176587
SMC3 structural maintenance of chromosomes 3 0.176305
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 0.174635
HIST2H4B histone cluster 2, H4b 0.16935
HIST1H4C histone cluster 1, H4c 0.16935
HIST2H4A histone cluster 2, H4a 0.16935
HIST1H4B histone cluster 1, H4b 0.16935
HIST1H4A histone cluster 1, H4a 0.16935
HIST1H4F histone cluster 1, H4f 0.16935
HIST1H4H histone cluster 1, H4h 0.16935
HIST1H4J histone cluster 1, H4j 0.16935
HIST1H4K histone cluster 1, H4k 0.16935
HIST1H4D histone cluster 1, H4d 0.16935
HIST1H4E histone cluster 1, H4e 0.16935
HIST1H4I histone cluster 1, H4i 0.16935
HIST1H4L histone cluster 1, H4l 0.169099
HIST4H4 histone cluster 4, H4 0.169099
BIRC2 baculoviral IAP repeat containing 2 0.165
TOP3A topoisomerase (DNA) III alpha 0.160053
BIRC3 baculoviral IAP repeat containing 3 0.157578