x chromosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males. (Gene Ontology, GO_0000805)
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Genes

275 proteins co-occuring with the x chromosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
PGK1 phosphoglycerate kinase 1 1.61002
AMELY amelogenin, Y-linked 1.56275
AMELX amelogenin, X-linked 1.55537
AR androgen receptor 1.4593
NDP Norrie disease (pseudoglioma) 1.34665
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 1.31627
COL4A5 collagen, type IV, alpha 5 1.28356
FMR1 fragile X mental retardation 1 1.24288
MAOA monoamine oxidase A 1.21894
ZFX zinc finger protein, X-linked 1.17876
ZNF41 zinc finger protein 41 1.16696
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6 1.14597
ZFY zinc finger protein, Y-linked 1.13369
SRY sex determining region Y 1.0398
ARSF arylsulfatase F 1.00744
ZNF674 zinc finger protein 674 1.00744
ANOS1 anosmin 1 1.00103
PRR20C proline rich 20C 0.987806
PRR20A proline rich 20A 0.987806
PRR20E proline rich 20E 0.987806
ARMCX5 armadillo repeat containing, X-linked 5 0.98488
PHKG1 phosphorylase kinase, gamma 1 (muscle) 0.98488
BHLHB9 basic helix-loop-helix domain containing, class B, 9 0.98488
SMPX small muscle protein, X-linked 0.970331
MECP2 methyl CpG binding protein 2 0.967437
STS steroid sulfatase (microsomal), isozyme S 0.957352
GPRASP2 G protein-coupled receptor associated sorting protein 2 0.946382
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3 0.929363
G6PD glucose-6-phosphate dehydrogenase 0.899962
CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit 0.894406
HPRT1 hypoxanthine phosphoribosyltransferase 1 0.886551
GLA galactosidase, alpha 0.883321
CDKL5 cyclin-dependent kinase-like 5 0.869966
EBPL emopamil binding protein-like 0.868586
IDS iduronate 2-sulfatase 0.857095
AFF2 AF4/FMR2 family, member 2 0.848369
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 0.837351
OTC ornithine carbamoyltransferase 0.832302
F9 coagulation factor IX 0.831384
ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 0.826336
FRMD7 FERM domain containing 7 0.825418
COL4A6 collagen, type IV, alpha 6 0.809817
EBP emopamil binding protein (sterol isomerase) 0.801104
POU3F4 POU class 3 homeobox 4 0.779126
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.778669
CDY2A chromodomain protein, Y-linked, 2A 0.773645
MSL2 male-specific lethal 2 homolog (Drosophila) 0.761342
TGIF2LY TGFB-induced factor homeobox 2-like, Y-linked 0.750904
CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 0.750904
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.749094
KDM5C lysine (K)-specific demethylase 5C 0.748189
SOX3 SRY (sex determining region Y)-box 3 0.741867
NXF3 nuclear RNA export factor 3 0.737363
DMD dystrophin 0.734217
TMEM185A transmembrane protein 185A 0.726152
ZNF81 zinc finger protein 81 0.726152
RPGR retinitis pigmentosa GTPase regulator 0.710579
ZNF711 zinc finger protein 711 0.705273
HCCS holocytochrome c synthase 0.67246
CDY1B chromodomain protein, Y-linked, 1B 0.671159
HSFY2 heat shock transcription factor, Y linked 2 0.668126
HSFY1 heat shock transcription factor, Y-linked 1 0.668126
PHKB phosphorylase kinase, beta 0.664664
SMS spermine synthase 0.664664
CHML choroideremia-like (Rab escort protein 2) 0.661208
WDR45 WD repeat domain 45 0.660776
SERPINA7 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 0.658619
XG Xg blood group 0.65345
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.644001
GPR34 G protein-coupled receptor 34 0.638861
TGIF2LX TGFB-induced factor homeobox 2-like, X-linked 0.638861
L1CAM L1 cell adhesion molecule 0.625632
EDA2R ectodysplasin A2 receptor 0.622654
F8 coagulation factor VIII, procoagulant component 0.619255
GPRASP1 G protein-coupled receptor associated sorting protein 1 0.617982
GDI1 GDP dissociation inhibitor 1 0.612895
OPHN1 oligophrenin 1 0.601487
MSL3 male-specific lethal 3 homolog (Drosophila) 0.596014
PHKA1 phosphorylase kinase, alpha 1 (muscle) 0.593492
APRT adenine phosphoribosyltransferase 0.590553
VCY1B variable charge, Y-linked 1B 0.588037
VCY variable charge, Y-linked 0.588037
AVPR2 arginine vasopressin receptor 2 0.580922
MAOB monoamine oxidase B 0.579251
OCRL oculocerebrorenal syndrome of Lowe 0.57008
PIGA phosphatidylinositol glycan anchor biosynthesis, class A 0.565508
OAT ornithine aminotransferase 0.563432
CDX4 caudal type homeobox 4 0.5568
CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 0.554732
VCX variable charge, X-linked 0.554318
VCX3B variable charge, X-linked 3B 0.554318
VCX2 variable charge, X-linked 2 0.554318
LDOC1 leucine zipper, down-regulated in cancer 1 0.551838
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit 0.544
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 0.539883
ARX aristaless related homeobox 0.53906
TRPM6 transient receptor potential cation channel, subfamily M, member 6 0.538649
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 0.537005
CTAG2 cancer/testis antigen 2 0.535772
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.523476
PAGE5 P antigen family, member 5 (prostate associated) 0.520615
DUSP9 dual specificity phosphatase 9 0.520206
MMP20 matrix metallopeptidase 20 0.517348
XK X-linked Kx blood group 0.516124
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1 0.515716
VCX3A variable charge, X-linked 3A 0.515716
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 0.514493
MAGT1 magnesium transporter 1 0.513677
PORCN porcupine homolog (Drosophila) 0.503912
PRKY protein kinase, Y-linked, pseudogene 0.502693
PRKX protein kinase, X-linked 0.502288
KIAA0391 KIAA0391 0.489731
TNXB tenascin XB 0.488115
CCNB3 cyclin B3 0.487307
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled 0.481661
WLS wntless Wnt ligand secretion mediator 0.477233
GJB1 gap junction protein, beta 1, 32kDa 0.475625
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.473215
DLG3 discs, large homolog 3 (Drosophila) 0.465198
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 0.461599
COL4A4 collagen, type IV, alpha 4 0.4608
CDYL chromodomain protein, Y-like 0.457208
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae) 0.454019
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.453223
RP2 retinitis pigmentosa 2 (X-linked recessive) 0.444085
PTER phosphotriesterase related 0.439728
SLC41A1 solute carrier family 41 (magnesium transporter), member 1 0.437356
SDF2 stromal cell-derived factor 2 0.43696
AMICA1 adhesion molecule, interacts with CXADR antigen 1 0.431435
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 0.430647
KRT72 keratin 72, type II 0.427104
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.427104
GGCT gamma-glutamylcyclotransferase 0.426711
DNASE1L1 deoxyribonuclease I-like 1 0.425531
RAB33A RAB33A, member RAS oncogene family 0.417294
FSIP1 fibrous sheath interacting protein 1 0.408309
ELP4 elongator acetyltransferase complex subunit 4 0.398975
PGK2 phosphoglycerate kinase 2 0.39626
ARSH arylsulfatase family, member H 0.393162
GK glycerol kinase 0.387751
BEX1 brain expressed, X-linked 1 0.385822
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.383509
BEX2 brain expressed X-linked 2 0.382739
PHF8 PHD finger protein 8 0.380045
NXF2B nuclear RNA export factor 2B 0.377738
NXF2 nuclear RNA export factor 2 0.377738
H2AFB2 H2A histone family, member B2 0.368536
PAX1 paired box 1 0.362804
ECEL1 endothelin converting enzyme-like 1 0.35899
LRMP lymphoid-restricted membrane protein 0.354802
SHROOM2 shroom family member 2 0.353662
PPP1R10 protein phosphatase 1, regulatory subunit 10 0.351762
THEM4 thioesterase superfamily member 4 0.351762
CTCF CCCTC-binding factor (zinc finger protein) 0.351002
UBA1 ubiquitin-like modifier activating enzyme 1 0.351002
AGTR2 angiotensin II receptor, type 2 0.347587
TAZ tafazzin 0.347587
AQP2 aquaporin 2 (collecting duct) 0.344935
SLC9A7 solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 0.343421
COG6 component of oligomeric golgi complex 6 0.340017
F8A1 coagulation factor VIII-associated 1 0.339639
F8A2 coagulation factor VIII-associated 2 0.339639
DOCK11 dedicator of cytokinesis 11 0.338506
TSPY1 testis specific protein, Y-linked 1 0.333225
ARSE arylsulfatase E (chondrodysplasia punctata 1) 0.331719
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.325327
PRB3 proline-rich protein BstNI subfamily 3 0.323825
RPS4X ribosomal protein S4, X-linked 0.318579
TSPAN7 tetraspanin 7 0.31783
CFP complement factor properdin 0.316708
HIST2H2AC histone cluster 2, H2ac 0.311851
HIST2H2AA4 histone cluster 2, H2aa4 0.311478
HIST2H2AA3 histone cluster 2, H2aa3 0.311478
TSPY3 testis specific protein, Y-linked 3 0.305888
ARSD arylsulfatase D 0.305888
TSPY10 testis specific protein, Y-linked 10 0.305888
SKP1 S-phase kinase-associated protein 1 0.301797
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.29994
ACSL4 acyl-CoA synthetase long-chain family member 4 0.297713
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.292527
NLGN3 neuroligin 3 0.28846
RBMY1A1 RNA binding motif protein, Y-linked, family 1, member A1 0.288091
MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) 0.282558
ZNF222 zinc finger protein 222 0.277038
HIST1H4D histone cluster 1, H4d 0.275569
HIST1H4I histone cluster 1, H4i 0.275569
HIST1H4J histone cluster 1, H4j 0.275569
HIST1H4H histone cluster 1, H4h 0.275569
HIST2H4A histone cluster 2, H4a 0.275569
HIST1H4K histone cluster 1, H4k 0.275569
HIST1H4E histone cluster 1, H4e 0.275569
HIST1H4F histone cluster 1, H4f 0.275569
HIST1H4A histone cluster 1, H4a 0.275569
HIST1H4B histone cluster 1, H4b 0.275569
HIST1H4C histone cluster 1, H4c 0.275569
HIST2H4B histone cluster 2, H4b 0.275569
HIST4H4 histone cluster 4, H4 0.275202
HIST1H4L histone cluster 1, H4l 0.275202
CYBB cytochrome b-245, beta polypeptide 0.274835
PIGT phosphatidylinositol glycan anchor biosynthesis, class T 0.2708
GGN gametogenetin 0.270434
TMC1 transmembrane channel-like 1 0.268603
BCOR BCL6 corepressor 0.264215
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.26312
PQBP1 polyglutamine binding protein 1 0.260931
PLP1 proteolipid protein 1 0.254017
CLDN2 claudin 2 0.252202
SAP30 Sin3A-associated protein, 30kDa 0.249664
FSCN1 fascin actin-bundling protein 1 0.247854
SLC5A5 solute carrier family 5 (sodium/iodide cotransporter), member 5 0.247492
GNAS GNAS complex locus 0.24424
PHB2 prohibitin 2 0.242076
MCRS1 microspherule protein 1 0.239557
H2AFY2 H2A histone family, member Y2 0.237042
NDUFA1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa 0.236683
H2AFY H2A histone family, member Y 0.236324
DHCR7 7-dehydrocholesterol reductase 0.234891
FHL1 four and a half LIM domains 1 0.231672
IL9 interleukin 9 0.230245
WNT7B wingless-type MMTV integration site family, member 7B 0.229888
TPH2 tryptophan hydroxylase 2 0.224913
NRCAM neuronal cell adhesion molecule 0.223143
GRM8 glutamate receptor, metabotropic 8 0.221025
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4 0.220673
WDR20 WD repeat domain 20 0.219617
LARS leucyl-tRNA synthetase 0.218914
UBE2A ubiquitin-conjugating enzyme E2A 0.217861
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.216111
NR0B1 nuclear receptor subfamily 0, group B, member 1 0.21228
GLUD2 glutamate dehydrogenase 2 0.210549
OCM oncomodulin 0.208137
DIAPH2 diaphanous-related formin 2 0.200328
OCM2 oncomodulin 2 0.194371
DAZ2 deleted in azoospermia 2 0.193719
IFNA21 interferon, alpha 21 0.19307
DAZ1 deleted in azoospermia 1 0.191456
PEG3 paternally expressed 3 0.190175
ZKSCAN7 zinc finger with KRAB and SCAN domains 7 0.186397
SATB2 SATB homeobox 2 0.184241
CPS1 carbamoyl-phosphate synthase 1, mitochondrial 0.183631
PNMA1 paraneoplastic Ma antigen 1 0.182122
CHD7 chromodomain helicase DNA binding protein 7 0.177154
TNMD tenomodulin 0.175745
CHM choroideremia (Rab escort protein 1) 0.175188
STRA8 stimulated by retinoic acid 8 0.173003
RSPO1 R-spondin 1 0.170114
OFD1 oral-facial-digital syndrome 1 0.168101
ESX1 ESX homeobox 1 0.164315
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 0.163865
HLA-DRB5 major histocompatibility complex, class II, DR beta 5 0.16298
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.160658
H2AFJ H2A histone family, member J 0.160154
HIST1H2AD histone cluster 1, H2ad 0.160154
HIST1H2AJ histone cluster 1, H2aj 0.160154
HIST1H2AH histone cluster 1, H2ah 0.160154
HIST1H2AM histone cluster 1, H2am 0.160154
KEL Kell blood group, metallo-endopeptidase 0.160053
HIST1H2AG histone cluster 1, H2ag 0.159856
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 0.159856
COL11A2 collagen, type XI, alpha 2 0.159658
HIST1H2AE histone cluster 1, H2ae 0.159268
HIST1H2AB histone cluster 1, H2ab 0.159268
H2AFV H2A histone family, member V 0.159171
H2AFB1 H2A histone family, member B1 0.158408
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 0.158129
CDR2 cerebellar degeneration-related protein 2, 62kDa 0.156863
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.156513
SATB1 SATB homeobox 1 0.144721
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.143229
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.141839
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 0.14153
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.138913
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.138856
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.137618
SHBG sex hormone-binding globulin 0.136521