viral inner capsid Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions. (Gene Ontology, GO_0039625)
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Genes

31 proteins co-occuring with the viral inner capsid cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SEMG1 semenogelin I 1.94251
TXNL4B thioredoxin-like 4B 1.26022
PRAMEF20 PRAME family member 20 1.19623
ICT1 immature colon carcinoma transcript 1 1.07055
ARMC9 armadillo repeat containing 9 1.06094
SLC10A3 solute carrier family 10, member 3 0.936432
ZMYND10 zinc finger, MYND-type containing 10 0.88286
SH2D3A SH2 domain containing 3A 0.87733
GYPA glycophorin A (MNS blood group) 0.874567
RERE arginine-glutamic acid dipeptide (RE) repeats 0.835515
GLYATL1 glycine-N-acyltransferase-like 1 0.793771
CD79A CD79a molecule, immunoglobulin-associated alpha 0.786902
KRAS Kirsten rat sarcoma viral oncogene homolog 0.704831
AP1M2 adaptor-related protein complex 1, mu 2 subunit 0.690326
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.687264
ZNF185 zinc finger protein 185 (LIM domain) 0.664232
SRPR signal recognition particle receptor (docking protein) 0.610355
CLPS colipase, pancreatic 0.586361
ASPN asporin 0.567585
TFF3 trefoil factor 3 (intestinal) 0.553491
CD2 CD2 molecule 0.510418
PRRC2A proline-rich coiled-coil 2A 0.490135
PSEN2 presenilin 2 0.381969
ENGASE endo-beta-N-acetylglucosaminidase 0.380045
GSTM1 glutathione S-transferase mu 1 0.353282
GYPE glycophorin E (MNS blood group) 0.286245
CD46 CD46 molecule, complement regulatory protein 0.275569
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.255107
LPO lactoperoxidase 0.225622
MAP1B microtubule-associated protein 1B 0.215761
TLR3 toll-like receptor 3 0.211933