viral hepatitis Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A hepatitis that involves viral infection causing inflammation of the liver. (Human Disease Ontology, DOID_1884)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0006562
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Genes

46 genes associated with the viral hepatitis phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HPR haptoglobin-related protein 2.64633
HLA-DPB1 major histocompatibility complex, class II, DP beta 1 2.38985
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 2.37236
IFNL3 interferon, lambda 3 2.21644
HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 2.11688
DDRGK1 DDRGK domain containing 1 2.09684
TCF19 transcription factor 19 1.90008
EHMT2 euchromatic histone-lysine N-methyltransferase 2 1.57384
TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 1.35825
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 1.3391
HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 1.33197
MIR3135B microRNA 3135b 1.24751
CCHCR1 coiled-coil alpha-helical rod protein 1 1.21898
DDR1 discoidin domain receptor tyrosine kinase 1 1.21674
HLA-DRA major histocompatibility complex, class II, DR alpha 1.20161
SFTA2 surfactant associated 2 1.19766
GTF2H4 general transcription factor IIH, polypeptide 4, 52kDa 1.17685
EFCAB14 EF-hand calcium binding domain 14 1.04365
KCNB1 potassium channel, voltage gated Shab related subfamily B, member 1 1.00319
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 1.00059
AK9 adenylate kinase 9 0.882984
DNASE2B deoxyribonuclease II beta 0.882984
CWH43 cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) 0.868241
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.801631
IKZF2 IKAROS family zinc finger 2 (Helios) 0.777194
GRIP1 glutamate receptor interacting protein 1 0.754273
ASIC2 acid sensing (proton gated) ion channel 2 0.749042
FMN1 formin 1 0.737224
HIRA histone cell cycle regulator 0.734978
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.708265
SLC19A3 solute carrier family 19 (thiamine transporter), member 3 0.706055
CLTCL1 clathrin, heavy chain-like 1 0.696681
LOC643542 uncharacterized LOC643542 0.675718
ITGA1 integrin, alpha 1 0.669923
MECOM MDS1 and EVI1 complex locus 0.660262
ACVR1 activin A receptor, type I 0.656005
COL19A1 collagen, type XIX, alpha 1 0.652631
SKIL SKI-like proto-oncogene 0.649829
COL4A1 collagen, type IV, alpha 1 0.645131
GIGYF1 GRB10 interacting GYF protein 1 0.628362
LRP1B low density lipoprotein receptor-related protein 1B 0.622073
MAN2B2 mannosidase, alpha, class 2B, member 2 0.619356
MACF1 microtubule-actin crosslinking factor 1 0.60709
MTCL1 microtubule crosslinking factor 1 0.58403
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 0.579628
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.578475