uveal melanoma cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Ocular melanoma consisting of overgrowth of uveal melanocytes. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004980)
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Genes

120 proteins co-occuring with the tissue uveal melanoma cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
SP6 Sp6 transcription factor 1.78588
OCM oncomodulin 1.74127
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 1.47568
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 1.2931
CNKSR3 CNKSR family member 3 1.22469
PTP4A3 protein tyrosine phosphatase type IVA, member 3 1.20378
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) 1.17447
RASEF RAS and EF-hand domain containing 1.15673
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 1.04533
OCM2 oncomodulin 2 1.00327
VBP1 von Hippel-Lindau binding protein 1 0.98282
MIR137 microRNA 137 0.97285
MET MET proto-oncogene, receptor tyrosine kinase 0.949531
IGF1R insulin-like growth factor 1 receptor 0.910093
PMEL premelanosome protein 0.838672
NUBPL nucleotide binding protein-like 0.831966
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3 0.827778
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.820248
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 0.800208
SP8 Sp8 transcription factor 0.744627
LZTS1 leucine zipper, putative tumor suppressor 1 0.743801
ZBTB10 zinc finger and BTB domain containing 10 0.724453
TUBA1B tubulin, alpha 1b 0.721577
LOXL3 lysyl oxidase-like 3 0.717882
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.70927
LOXL4 lysyl oxidase-like 4 0.684327
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5 0.659085
BVES blood vessel epicardial substance 0.650966
RPSA ribosomal protein SA 0.648532
OSTM1 osteopetrosis associated transmembrane protein 1 0.6461
PARK7 parkinson protein 7 0.644479
CUL2 cullin 2 0.644074
TUBA1C tubulin, alpha 1c 0.631123
TUBB2A tubulin, beta 2A class IIa 0.625465
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) 0.612958
HLA-E major histocompatibility complex, class I, E 0.586427
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.584422
ANXA5 annexin A5 0.577215
MMP2 matrix metallopeptidase 2 0.575616
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.575616
TUBB tubulin, beta class I 0.571619
VEGFA vascular endothelial growth factor A 0.550503
CLEC11A C-type lectin domain family 11, member A 0.546929
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) 0.546533
FN1 fibronectin 1 0.544152
YBX3 Y box binding protein 3 0.540585
HLA-B major histocompatibility complex, class I, B 0.539396
SUCLG1 succinate-CoA ligase, alpha subunit 0.5228
HLA-A major histocompatibility complex, class I, A 0.521223
MIA melanoma inhibitory activity 0.516104
PERP PERP, TP53 apoptosis effector 0.515317
COL4A2 collagen, type IV, alpha 2 0.51453
MMP28 matrix metallopeptidase 28 0.512957
MTNR1B melatonin receptor 1B 0.505495
ERP29 endoplasmic reticulum protein 29 0.499615
CTNND2 catenin (cadherin-associated protein), delta 2 0.49844
TYR tyrosinase 0.497266
MLANA melan-A 0.495309
AHRR aryl-hydrocarbon receptor repressor 0.486716
CIITA class II, major histocompatibility complex, transactivator 0.486716
CDC37 cell division cycle 37 0.477367
TP53 tumor protein p53 0.4634
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.456828
S100A2 S100 calcium binding protein A2 0.456442
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.455284
CD59 CD59 molecule, complement regulatory protein 0.443347
LEF1 lymphoid enhancer-binding factor 1 0.437589
CCNE2 cyclin E2 0.436822
SDCBP syndecan binding protein (syntenin) 0.43146
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.430312
RASSF1 Ras association (RalGDS/AF-6) domain family member 1 0.424199
ULBP1 UL16 binding protein 1 0.419242
MITF microphthalmia-associated transcription factor 0.414293
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.413912
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.410111
TSN translin 0.407073
CCND1 cyclin D1 0.405176
LOX lysyl oxidase 0.40366
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 0.391176
CCL27 chemokine (C-C motif) ligand 27 0.381755
CDH5 cadherin 5, type 2 (vascular endothelium) 0.380251
LOXL2 lysyl oxidase-like 2 0.377621
PARG poly (ADP-ribose) glycohydrolase 0.374993
CXCL12 chemokine (C-X-C motif) ligand 12 0.372743
SELENBP1 selenium binding protein 1 0.364139
CDK6 cyclin-dependent kinase 6 0.358546
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.357058
CCND2 cyclin D2 0.351485
PLG plasminogen 0.34371
GTF2B general transcription factor IIB 0.332294
CD46 CD46 molecule, complement regulatory protein 0.328262
MICB MHC class I polypeptide-related sequence B 0.323874
RECK reversion-inducing-cysteine-rich protein with kazal motifs 0.316588
PDIA3 protein disulfide isomerase family A, member 3 0.314772
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.312232
SEBOX SEBOX homeobox 0.310783
CASP10 caspase 10, apoptosis-related cysteine peptidase 0.308251
BAX BCL2-associated X protein 0.30464
BCL2L1 BCL2-like 1 0.29996
HTRA2 HtrA serine peptidase 2 0.298883
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.296372
EDN2 endothelin 2 0.289939
PAX4 paired box 4 0.289939
ALCAM activated leukocyte cell adhesion molecule 0.272649
IFNA1 interferon, alpha 1 0.270909
BIRC5 baculoviral IAP repeat containing 5 0.269174
MVP major vault protein 0.268828
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.268137
MIR145 microRNA 145 0.2559
CXCR4 chemokine (C-X-C motif) receptor 4 0.251279
THBS1 thrombospondin 1 0.247079
IDO1 indoleamine 2,3-dioxygenase 1 0.242672
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.235748
VEGFB vascular endothelial growth factor B 0.229568
TYRP1 tyrosinase-related protein 1 0.227186
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.219485
CD44 CD44 molecule (Indian blood group) 0.217974
FASLG Fas ligand (TNF superfamily, member 6) 0.216933
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.214954
IL1RN interleukin 1 receptor antagonist 0.214765