ulcerative colitis Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A colitis that is predominantly confined to the mucosa located_in colon and includes characteristic ulcers, or open sores. (Human Disease Ontology, DOID_8577)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0100279
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Genes

53 genes associated with the ulcerative colitis phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
IL1RL1 interleukin 1 receptor-like 1 2.95702
CCHCR1 coiled-coil alpha-helical rod protein 1 2.75624
IL18RAP interleukin 18 receptor accessory protein 2.37936
IL18R1 interleukin 18 receptor 1 2.33605
SLC9A4 solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4 2.3201
IL23R interleukin 23 receptor 2.17307
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 2.04964
OTUD3 OTU deubiquitinase 3 2.03027
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 1.97023
IL1R1 interleukin 1 receptor, type I 1.94622
CARD9 caspase recruitment domain family, member 9 1.9211
IL1RL2 interleukin 1 receptor-like 2 1.85891
NR5A2 nuclear receptor subfamily 5, group A, member 2 1.84688
APEH acylaminoacyl-peptide hydrolase 1.84688
GNA12 guanine nucleotide binding protein (G protein) alpha 12 1.83254
PUS10 pseudouridylate synthase 10 1.67051
C1ORF106 chromosome 1 open reading frame 106 1.61591
IL10 interleukin 10 1.5645
TTL tubulin tyrosine ligase 1.53327
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 1.53327
DAP death-associated protein 1.5239
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 1.5239
LSP1 lymphocyte-specific protein 1 1.43716
RTEL1 regulator of telomere elongation helicase 1 1.41863
CCNY cyclin Y 1.36794
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 1.32793
GPR35 G protein-coupled receptor 35 1.32793
MST1 macrophage stimulating 1 1.29386
PARK7 parkinson protein 7 1.28282
BSN bassoon presynaptic cytomatrix protein 1.26545
NKX2-3 NK2 homeobox 3 1.24751
SFMBT1 Scm-like with four mbt domains 1 1.24751
MAML2 mastermind-like 2 (Drosophila) 1.24751
GSDMB gasdermin B 1.19958
TCF4 transcription factor 4 1.19958
ZFP90 ZFP90 zinc finger protein 1.19958
PLCL1 phospholipase C-like 1 1.19958
IL17REL interleukin 17 receptor E-like 1.18704
IL7R interleukin 7 receptor 1.18704
DENND1B DENN/MADD domain containing 1B 1.12851
IL26 interleukin 26 1.08774
ADAD1 adenosine deaminase domain containing 1 (testis-specific) 1.05066
UBE2L3 ubiquitin-conjugating enzyme E2L 3 1.04468
HDAC9 histone deacetylase 9 1.00059
CIITA class II, major histocompatibility complex, transactivator 0.969142
BTNL2 butyrophilin-like 2 0.969142
SATB2 SATB homeobox 2 0.919744
LAMB1 laminin, beta 1 0.882984
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.868241
FOS FBJ murine osteosarcoma viral oncogene homolog 0.825497
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 0.74997
DSCAM Down syndrome cell adhesion molecule 0.726484
ESRRG estrogen-related receptor gamma 0.696021