tubular endosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A network of fine tubules in the vicinity of the Golgi complex and around the centriole. (Gene Ontology, GO_0097422)
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Genes

50 proteins co-occuring with the tubular endosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ARF6 ADP-ribosylation factor 6 1.15109
RAB35 RAB35, member RAS oncogene family 0.961187
MON2 MON2 homolog (S. cerevisiae) 0.939742
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1 0.919514
TBC1D10A TBC1 domain family, member 10A 0.908785
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 0.866746
EHD1 EH-domain containing 1 0.863988
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted 0.827254
TF transferrin 0.825418
PI4K2A phosphatidylinositol 4-kinase type 2 alpha 0.79148
RAB8A RAB8A, member RAS oncogene family 0.784156
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.775014
SNX1 sorting nexin 1 0.768627
ACAP1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 0.760433
WTIP Wilms tumor 1 interacting protein 0.716346
SNX3 sorting nexin 3 0.703067
RAB21 RAB21, member RAS oncogene family 0.694709
LMBRD1 LMBR1 domain containing 1 0.68639
CD164 CD164 molecule, sialomucin 0.678978
MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 0.671593
CPD carboxypeptidase D 0.612471
DRD3 dopamine receptor D3 0.585942
IGF2R insulin-like growth factor 2 receptor 0.536183
FOLR2 folate receptor 2 (fetal) 0.53413
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.49661
SNAPIN SNAP-associated protein 0.477636
FOLR1 folate receptor 1 (adult) 0.477233
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 0.47442
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 0.460001
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 0.444482
CDC16 cell division cycle 16 0.427891
HAND1 heart and neural crest derivatives expressed 1 0.414164
EEA1 early endosome antigen 1 0.391228
ANXA7 annexin A7 0.385436
CD63 CD63 molecule 0.371599
VAMP8 vesicle-associated membrane protein 8 0.366623
AMPH amphiphysin 0.327956
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.326453
PIGR polymeric immunoglobulin receptor 0.304399
TFRC transferrin receptor 0.289938
SAA1 serum amyloid A1 0.286983
PGRMC1 progesterone receptor membrane component 1 0.274101
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.260931
CIITA class II, major histocompatibility complex, transactivator 0.260566
VAMP3 vesicle-associated membrane protein 3 0.259473
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.242076
LCT lactase 0.168349
F2 coagulation factor II (thrombin) 0.167856
MAG myelin associated glycoprotein 0.16342
NPHS1 nephrosis 1, congenital, Finnish type (nephrin) 0.161068