syncope Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. (Human Phenotype Ontology, HP_0001279)
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44 genes associated with the syncope phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HBB hemoglobin, beta 2.36493
OR51F1 olfactory receptor, family 51, subfamily F, member 1 (gene/pseudogene) 1.79316
OR51B5 olfactory receptor, family 51, subfamily B, member 5 1.6456
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 1.5462
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 1.41863
CDH13 cadherin 13 1.08774
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1.06211
ZNF804A zinc finger protein 804A 1.04365
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.899912
NR1I2 nuclear receptor subfamily 1, group I, member 2 0.886251
OR51E2 olfactory receptor, family 51, subfamily E, member 2 0.881393
MAST2 microtubule associated serine/threonine kinase 2 0.850788
DIS3L2 DIS3 like 3'-5' exoribonuclease 2 0.844241
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 0.844241
PLXNA4 plexin A4 0.834343
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.834343
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1 0.817516
PLEKHA6 pleckstrin homology domain containing, family A member 6 0.809986
PARK2 parkin RBR E3 ubiquitin protein ligase 0.809986
FAM53B family with sequence similarity 53, member B 0.7965
CIAPIN1 cytokine induced apoptosis inhibitor 1 0.747666
MAML2 mastermind-like 2 (Drosophila) 0.734535
STON2 stonin 2 0.734535
WWOX WW domain containing oxidoreductase 0.722116
MEIS1 Meis homeobox 1 0.703894
MTMR10 myotubularin related protein 10 0.703894
HNMT histamine N-methyltransferase 0.697013
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 0.687523
TSHZ2 teashirt zinc finger homeobox 2 0.681679
STAC SH3 and cysteine rich domain 0.681679
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.661809
OR13D1 olfactory receptor, family 13, subfamily D, member 1 0.639858
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.624663
GABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3 0.622665
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.613082
LOC648987 uncharacterized LOC648987 0.609408
RYR2 ryanodine receptor 2 (cardiac) 0.602436
ZNF329 zinc finger protein 329 0.602436
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.597506
OPCML opioid binding protein/cell adhesion molecule-like 0.594349
LOC400927 TPTE and PTEN homologous inositol lipid phosphatase pseudogene 0.592807
LINC01587 long intergenic non-protein coding RNA 1587 0.591289
DCLK1 doublecortin-like kinase 1 0.580678
DEPTOR DEP domain containing MTOR-interacting protein 0.562717