subcommissural organ Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description An ependymal derivative located at the junction of the third ventricle and the cerebral aqueduct, secreting somatostatin. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001820)
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Genes

94 proteins co-occuring with the tissue subcommissural organ in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
RFX4 regulatory factor X, 4 (influences HLA class II expression) 1.70893
PTPRS protein tyrosine phosphatase, receptor type, S 1.68105
ZFHX4 zinc finger homeobox 4 1.51095
RFX3 regulatory factor X, 3 (influences HLA class II expression) 1.42784
GLO1 glyoxalase I 1.1111
TNPO2 transportin 2 1.10624
SYT17 synaptotagmin XVII 1.05413
MGAT4C MGAT4 family, member C 1.01156
DAGLB diacylglycerol lipase, beta 1.00981
GFAP glial fibrillary acidic protein 1.00109
TNPO1 transportin 1 0.987597
TNPO3 transportin 3 0.952547
DAGLA diacylglycerol lipase, alpha 0.859258
HSD11B2 hydroxysteroid (11-beta) dehydrogenase 2 0.836995
LDLR low density lipoprotein receptor 0.793126
TTR transthyretin 0.716651
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.71501
CFHR1 complement factor H-related 1 0.693719
SPON1 spondin 1, extracellular matrix protein 0.688817
ZFHX3 zinc finger homeobox 3 0.67658
MTNR1A melatonin receptor 1A 0.675357
CLDN3 claudin 3 0.672506
RGS16 regulator of G-protein signaling 16 0.667215
COL11A1 collagen, type XI, alpha 1 0.631527
LCN1 lipocalin 1 0.621024
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.61941
FANCC Fanconi anemia, complementation group C 0.616586
MSX1 msh homeobox 1 0.613764
SST somatostatin 0.613764
OXT oxytocin/neurophysin I prepropeptide 0.601283
SCGB1D1 secretoglobin, family 1D, member 1 0.576816
VWF von Willebrand factor 0.564434
CX3CL1 chemokine (C-X3-C motif) ligand 1 0.548914
ZHX2 zinc fingers and homeoboxes 2 0.534647
NR3C2 nuclear receptor subfamily 3, group C, member 2 0.523194
SAG S-antigen; retina and pineal gland (arrestin) 0.514136
PRAME preferentially expressed antigen in melanoma 0.512564
FOXJ1 forkhead box J1 0.510206
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.509027
TP73 tumor protein p73 0.506672
NES nestin 0.502357
UGDH UDP-glucose 6-dehydrogenase 0.492572
PRKG1 protein kinase, cGMP-dependent, type I 0.4914
POU4F2 POU class 4 homeobox 2 0.483596
OTX1 orthodenticle homeobox 1 0.483596
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.483206
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.476979
FANCD2 Fanconi anemia, complementation group D2 0.475034
TNR tenascin R 0.473869
PCSK2 proprotein convertase subtilisin/kexin type 2 0.471539
NPS neuropeptide S 0.471151
HOXD13 homeobox D13 0.46766
MGLL monoglyceride lipase 0.460692
ENO2 enolase 2 (gamma, neuronal) 0.459532
NPPC natriuretic peptide C 0.456055
SOX4 SRY (sex determining region Y)-box 4 0.45567
RFX1 regulatory factor X, 1 (influences HLA class II expression) 0.450271
SOX3 SRY (sex determining region Y)-box 3 0.446038
AVP arginine vasopressin 0.441042
NPAT nuclear protein, ataxia-telangiectasia locus 0.436055
BCAN brevican 0.419623
CALCA calcitonin-related polypeptide alpha 0.41848
NCAN neurocan 0.404039
SCG5 secretogranin V 0.402901
HGFAC HGF activator 0.396465
WDFY2 WD repeat and FYVE domain containing 2 0.380251
PAX2 paired box 2 0.369373
ASMT acetylserotonin O-methyltransferase 0.360782
TAC1 tachykinin, precursor 1 0.341126
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.33744
CREB1 cAMP responsive element binding protein 1 0.332294
SYP synaptophysin 0.323144
EN1 engrailed homeobox 1 0.312957
APLNR apelin receptor 0.312595
GLUL glutamate-ammonia ligase 0.28213
OPN4 opsin 4 0.275794
SOCS2 suppressor of cytokine signaling 2 0.266757
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.25858
CISH cytokine inducible SH2-containing protein 0.252919
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2) 0.249977
ACPP acid phosphatase, prostate 0.249329
NPPA natriuretic peptide A 0.242054
TJP1 tight junction protein 1 0.238108
WNT1 wingless-type MMTV integration site family, member 1 0.230931
NCAM1 neural cell adhesion molecule 1 0.223419
MDK midkine (neurite growth-promoting factor 2) 0.223177
PTN pleiotrophin 0.221521
AANAT aralkylamine N-acetyltransferase 0.219264
ACO2 aconitase 2, mitochondrial 0.217974
RDX radixin 0.216933
GAL galanin/GMAP prepropeptide 0.216325
DES desmin 0.21573
MSX2 msh homeobox 2 0.213833
KNG1 kininogen 1 0.212936