spliceosomal complex Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any of a series of ribonucleoprotein complexes that contain RNA and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the splicing of a messenger RNA primary transcript to excise an intron. (Gene Ontology, GO_0005681)
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Genes

147 proteins localized to the spliceosomal complex cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
BCAS2 breast carcinoma amplified sequence 2 0.663342
RBMX RNA binding motif protein, X-linked 0.663342
ALYREF Aly/REF export factor 0.663342
AQR aquarius intron-binding spliceosomal factor 0.663342
CDC40 cell division cycle 40 0.663342
SNRPA1 small nuclear ribonucleoprotein polypeptide A' 0.663342
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 0.663342
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.663342
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.663342
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1 0.663342
DGCR14 DiGeorge syndrome critical region gene 14 0.663342
WDR83 WD repeat domain 83 0.663342
ZCCHC8 zinc finger, CCHC domain containing 8 0.663342
RBM5 RNA binding motif protein 5 0.663342
RNPC3 RNA-binding region (RNP1, RRM) containing 3 0.663342
PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 0.663342
RALY RALY heterogeneous nuclear ribonucleoprotein 0.663342
RBM8A RNA binding motif protein 8A 0.663342
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.663342
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.663342
PRPF19 pre-mRNA processing factor 19 0.663342
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.663342
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 0.663342
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 0.663342
PHF5A PHD finger protein 5A 0.663342
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 0.663342
CWC15 CWC15 spliceosome-associated protein 0.663342
EFTUD2 elongation factor Tu GTP binding domain containing 2 0.663342
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 0.663342
FRG1 FSHD region gene 1 0.663342
SF3A3 splicing factor 3a, subunit 3, 60kDa 0.663342
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.663342
PABPC1 poly(A) binding protein, cytoplasmic 1 0.663342
CTNNBL1 catenin, beta like 1 0.663342
GCFC2 GC-rich sequence DNA-binding factor 2 0.663342
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.663342
SF3B5 splicing factor 3b, subunit 5, 10kDa 0.663342
SF3B4 splicing factor 3b, subunit 4, 49kDa 0.663342
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.663342
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.663342
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) 0.663342
CWC22 CWC22 spliceosome-associated protein 0.663342
SF3A2 splicing factor 3a, subunit 2, 66kDa 0.663342
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.663342
ADAR adenosine deaminase, RNA-specific 0.663342
SRSF1 serine/arginine-rich splicing factor 1 0.663342
SF3B3 splicing factor 3b, subunit 3, 130kDa 0.663342
SNRPN small nuclear ribonucleoprotein polypeptide N 0.663342
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 0.663342
SNRPF small nuclear ribonucleoprotein polypeptide F 0.663342
SNRPG small nuclear ribonucleoprotein polypeptide G 0.663342
SNRPE small nuclear ribonucleoprotein polypeptide E 0.663342
U2AF1 U2 small nuclear RNA auxiliary factor 1 0.663342
RAB43 RAB43, member RAS oncogene family 0.663342
EIF4A3 eukaryotic translation initiation factor 4A3 0.663342
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3 0.663342
GPATCH1 G patch domain containing 1 0.663342
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.663342
HNRNPF heterogeneous nuclear ribonucleoprotein F 0.663342
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 0.663342
PNN pinin, desmosome associated protein 0.663342
SNW1 SNW domain containing 1 0.663342
CDC5L cell division cycle 5-like 0.663342
SRRM1 serine/arginine repetitive matrix 1 0.663342
SRRM2 serine/arginine repetitive matrix 2 0.663342
PRPF4B pre-mRNA processing factor 4B 0.663342
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.663342
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.663342
RBMXL1 RNA binding motif protein, X-linked-like 1 0.663342
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 0.663342
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.663342
ISY1 ISY1 splicing factor homolog (S. cerevisiae) 0.663342
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.663342
XAB2 XPA binding protein 2 0.663342
SYF2 SYF2 pre-mRNA-splicing factor 0.663342
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) 0.663342
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.663342
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.663342
CACTIN cactin, spliceosome C complex subunit 0.663342
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 0.663342
RBM22 RNA binding motif protein 22 0.663342
SNRPB2 small nuclear ribonucleoprotein polypeptide B 0.663342
YBX1 Y box binding protein 1 0.663342
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.663342
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa 0.663342
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.663342
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 0.663342
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.663342
SART1 squamous cell carcinoma antigen recognized by T cells 0.663342
PLRG1 pleiotropic regulator 1 0.663342
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.663342
TXNL4A thioredoxin-like 4A 0.663342
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.663342
PRPF8 pre-mRNA processing factor 8 0.663342
PRPF3 pre-mRNA processing factor 3 0.663342
PRPF4 pre-mRNA processing factor 4 0.663342
PPIE peptidylprolyl isomerase E (cyclophilin E) 0.663342
CRNKL1 crooked neck pre-mRNA splicing factor 1 0.663342
PRPF6 pre-mRNA processing factor 6 0.663342
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.663342
TFIP11 tuftelin interacting protein 11 0.663342
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.237908
SNRNP35 small nuclear ribonucleoprotein 35kDa (U11/U12) 0.237908
ZCRB1 zinc finger CCHC-type and RNA binding motif 1 0.237908
IVNS1ABP influenza virus NS1A binding protein 0.237908
ZMAT5 zinc finger, matrin-type 5 0.237908
SNRPA small nuclear ribonucleoprotein polypeptide A 0.237908
SMNDC1 survival motor neuron domain containing 1 0.237908
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12) 0.237908
SNRNP25 small nuclear ribonucleoprotein 25kDa (U11/U12) 0.237908
PDCD7 programmed cell death 7 0.237908
API5 apoptosis inhibitor 5 0.237908
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.237908
PRPF18 pre-mRNA processing factor 18 0.237908
SF1 splicing factor 1 0.237908
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.237908
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.098109
USP39 ubiquitin specific peptidase 39 0.098109
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.098109
TTF2 transcription termination factor, RNA polymerase II 0.098109
PRPF38A pre-mRNA processing factor 38A 0.098109
PRPF38B pre-mRNA processing factor 38B 0.098109
HSPA8 heat shock 70kDa protein 8 0.098109
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.098109
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 0.098109
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.098109
SUGP1 SURP and G patch domain containing 1 0.098109
PPIH peptidylprolyl isomerase H (cyclophilin H) 0.098109
LGALS3 lectin, galactoside-binding, soluble, 3 0.098109
PRPF31 pre-mRNA processing factor 31 0.098109
AKAP17A A kinase (PRKA) anchor protein 17A 0.098109
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.098109
RBM17 RNA binding motif protein 17 0.098109
U2AF1L4 U2 small nuclear RNA auxiliary factor 1-like 4 0.098109
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 0.098109
WBP4 WW domain binding protein 4 0.098109
SCAF8 SR-related CTD-associated factor 8 0.098109
PPP1R8 protein phosphatase 1, regulatory subunit 8 0.098109
RBM28 RNA binding motif protein 28 0.098109
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 0.098109
RBM25 RNA binding motif protein 25 0.098109
PTBP2 polypyrimidine tract binding protein 2 0.03318
SRSF2 serine/arginine-rich splicing factor 2 0.03318
RHEB Ras homolog enriched in brain 0.03318
WAC WW domain containing adaptor with coiled-coil 0.03318
SNRPC small nuclear ribonucleoprotein polypeptide C 0.03318
TXNL4B thioredoxin-like 4B 0.03318