spherical high-density lipoprotein particle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A mature high-density lipoprotein (HDL) particle, converted from discoidal HDL particles following the esterification of cholesterol in the particle by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT). (Gene Ontology, GO_0034366)
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Genes

22 proteins co-occuring with the spherical high-density lipoprotein particle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LPA lipoprotein, Lp(a) 2.0685
LCAT lecithin-cholesterol acyltransferase 2.03434
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 1.81176
APOA1 apolipoprotein A-I 1.66236
PLTP phospholipid transfer protein 1.36033
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1 1.32438
APOA2 apolipoprotein A-II 1.27558
CETP cholesteryl ester transfer protein, plasma 1.22205
SPINK5 serine peptidase inhibitor, Kazal type 5 1.07005
SCARB1 scavenger receptor class B, member 1 0.959268
APOE apolipoprotein E 0.827254
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 0.536594
ABCG4 ATP-binding cassette, sub-family G (WHITE), member 4 0.449643
APOC1 apolipoprotein C-I 0.405971
CMA1 chymase 1, mast cell 0.390841
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 0.290678
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5 0.2708
APOB apolipoprotein B 0.26312
LPL lipoprotein lipase 0.254017
TMPRSS15 transmembrane protease, serine 15 0.246407
APOH apolipoprotein H (beta-2-glycoprotein I) 0.162546
USF1 upstream transcription factor 1 0.161068