sorting endosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles. (Gene Ontology, GO_0097443)
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Genes

98 proteins co-occuring with the sorting endosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
REP15 RAB15 effector protein 1.50001
TF transferrin 1.39517
RAB15 RAB15, member RAS oncogene family 1.31088
EEA1 early endosome antigen 1 1.25022
FCGRT Fc fragment of IgG, receptor, transporter, alpha 1.13676
TFRC transferrin receptor 1.09645
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 1.06903
RAB4A RAB4A, member RAS oncogene family 1.0253
SNX17 sorting nexin 17 0.874107
RAB5A RAB5A, member RAS oncogene family 0.818534
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 0.812111
ARF6 ADP-ribosylation factor 6 0.797895
HLA-DMB major histocompatibility complex, class II, DM beta 0.794687
RAB11A RAB11A, member RAS oncogene family 0.788733
OCIAD1 OCIA domain containing 1 0.781412
USP8 ubiquitin specific peptidase 8 0.762707
SNX1 sorting nexin 1 0.761342
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1 0.71768
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 0.701304
IGF2R insulin-like growth factor 2 receptor 0.699103
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 0.687264
RUFY1 RUN and FYVE domain containing 1 0.659482
LAMP1 lysosomal-associated membrane protein 1 0.656033
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.617133
SYNGR2 synaptogyrin 2 0.612895
KIF13A kinesin family member 13A 0.608663
GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1 0.599802
CLEC4C C-type lectin domain family 4, member C 0.598117
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 0.574244
MICALL2 MICAL-like 2 0.568001
RAB22A RAB22A, member RAS oncogene family 0.528798
AAK1 AP2 associated kinase 1 0.513677
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) 0.509197
CD1E CD1e molecule 0.506757
SNX4 sorting nexin 4 0.491348
STAB1 stabilin 1 0.47844
SNX3 sorting nexin 3 0.454019
NUMB numb homolog (Drosophila) 0.446069
RAB34 RAB34, member RAS oncogene family 0.439728
SVIL supervillin 0.436565
HLA-DMA major histocompatibility complex, class II, DM alpha 0.43538
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase 0.434985
LDLR low density lipoprotein receptor 0.430647
PIGR polymeric immunoglobulin receptor 0.426318
SNX5 sorting nexin 5 0.423567
ARF3 ADP-ribosylation factor 3 0.421604
VAMP3 vesicle-associated membrane protein 3 0.409089
EGFR epidermal growth factor receptor 0.398975
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.397423
WNK4 WNK lysine deficient protein kinase 4 0.397035
SNX2 sorting nexin 2 0.390068
CCR4 chemokine (C-C motif) receptor 4 0.388909
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2 0.385822
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 0.385051
DRD3 dopamine receptor D3 0.377738
CD63 CD63 molecule 0.360515
PIGA phosphatidylinositol glycan anchor biosynthesis, class A 0.354802
RAB35 RAB35, member RAS oncogene family 0.346829
LYST lysosomal trafficking regulator 0.335864
TGOLN2 trans-golgi network protein 2 0.33511
STX16 syntaxin 16 0.330966
RAB13 RAB13, member RAS oncogene family 0.329461
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 0.3227
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) 0.303655
LNPEP leucyl/cystinyl aminopeptidase 0.300311
EHD1 EH-domain containing 1 0.298084
WASH7P WAS protein family homolog 7 pseudogene 0.296972
WASH6P WAS protein family homolog 6 pseudogene 0.293637
WASH1 WAS protein family homolog 1 0.291047
GIPC1 GIPC PDZ domain containing family, member 1 0.282926
RHOQ ras homolog family member Q 0.280716
RAB10 RAB10, member RAS oncogene family 0.279612
ASGR2 asialoglycoprotein receptor 2 0.264215
ASGR1 asialoglycoprotein receptor 1 0.262755
CD1B CD1b molecule 0.260931
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.259473
NPC1L1 NPC1-like 1 0.25547
PROCR protein C receptor, endothelial 0.253291
MYO1B myosin IB 0.250026
RAP2B RAP2B, member of RAS oncogene family 0.24894
SAR1A secretion associated, Ras related GTPase 1A 0.242437
HLA-E major histocompatibility complex, class I, E 0.239916
RAB1B RAB1B, member RAS oncogene family 0.239557
STAB2 stabilin 2 0.237042
MYO5B myosin VB 0.237042
CD59 CD59 molecule, complement regulatory protein 0.231672
KLRC1 killer cell lectin-like receptor subfamily C, member 1 0.230958
LAMP2 lysosomal-associated membrane protein 2 0.218914
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.215761
M6PR mannose-6-phosphate receptor (cation dependent) 0.204039
KLRD1 killer cell lectin-like receptor subfamily D, member 1 0.200663
S100A10 S100 calcium binding protein A10 0.194371
ARF1 ADP-ribosylation factor 1 0.191777
FPR1 formyl peptide receptor 1 0.18516
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 0.182422
NOTCH1 notch 1 0.171673
SORT1 sortilin 1 0.159856
INS insulin 0.158882