small lymph nodes Gene Set

Dataset MPO Gene-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Underdevelopment of the lymph nodes. (Human Phenotype Ontology, HP_0002732)
External Link http://www.informatics.jax.org/searches/Phat.cgi?id=MP:0002217
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Genes

53 gene mutations causing the small lymph nodes phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset.

Symbol Name
ATM ATM serine/threonine kinase
BCL3 B-cell CLL/lymphoma 3
CCR7 chemokine (C-C motif) receptor 7
CCRL2 chemokine (C-C motif) receptor-like 2
CD3G CD3g molecule, gamma (CD3-TCR complex)
CD40LG CD40 ligand
CORO1A coronin, actin binding protein, 1A
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CYTIP cytohesin 1 interacting protein
DCLRE1C DNA cross-link repair 1C
DOCK2 dedicator of cytokinesis 2
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
FLT3 fms-related tyrosine kinase 3
FLT3LG fms-related tyrosine kinase 3 ligand
FOXN1 forkhead box N1
FPR2 formyl peptide receptor 2
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1
GIMAP1-GIMAP5 GIMAP1-GIMAP5 readthrough
ICOS inducible T-cell co-stimulator
IGHM immunoglobulin heavy constant mu
IL15 interleukin 15
IL15RA interleukin 15 receptor, alpha
IL2RG interleukin 2 receptor, gamma
IL34 interleukin 34
IL7 interleukin 7
IL7R interleukin 7 receptor
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)
ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
JAK3 Janus kinase 3
KMT2E lysine (K)-specific methyltransferase 2E
LBR lamin B receptor
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
MYC v-myc avian myelocytomatosis viral oncogene homolog
NCKAP1L NCK-associated protein 1-like
NEDD9 neural precursor cell expressed, developmentally down-regulated 9
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
NLK nemo-like kinase
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
PRKDC protein kinase, DNA-activated, catalytic polypeptide
RAG2 recombination activating gene 2
SATB1 SATB homeobox 1
SELL selectin L
SGPL1 sphingosine-1-phosphate lyase 1
SIT1 signaling threshold regulating transmembrane adaptor 1
SLC35C1 solute carrier family 35 (GDP-fucose transporter), member C1
TNF tumor necrosis factor
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15
TRAT1 T cell receptor associated transmembrane adaptor 1
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
ZAP70 zeta-chain (TCR) associated protein kinase 70kDa
ZEB1 zinc finger E-box binding homeobox 1