shortened qt interval Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Decreased time between the start of the Q wave and the end of the T wave as measured by the electrocardiogram (EKG). (Human Phenotype Ontology, HP_0012232)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0012232
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Genes

62 genes associated with the shortened qt interval phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 2.51121
CNOT1 CCR4-NOT transcription complex, subunit 1 2.10659
CEP85L centrosomal protein 85kDa-like 2.04042
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1 1.84227
RNF207 ring finger protein 207 1.81736
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 1.75033
SCN5A sodium channel, voltage gated, type V alpha subunit 1.68604
LIG3 ligase III, DNA, ATP-dependent 1.5239
FADS1 fatty acid desaturase 1 1.1838
C18ORF21 chromosome 18 open reading frame 21 1.09906
TCL6 T-cell leukemia/lymphoma 6 (non-protein coding) 1.08774
DPT dermatopontin 1.08558
TMEM44 transmembrane protein 44 1.0674
ARHGAP10 Rho GTPase activating protein 10 1.0674
PTPRG protein tyrosine phosphatase, receptor type, G 1.05869
RPRD1A regulation of nuclear pre-mRNA domain containing 1A 1.04774
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 1.04365
PDE3A phosphodiesterase 3A, cGMP-inhibited 1.04365
TTN titin 1.00059
IL5RA interleukin 5 receptor, alpha 1.00059
ELMO1 engulfment and cell motility 1 1.00059
TRPM7 transient receptor potential cation channel, subfamily M, member 7 1.00059
CLDN15 claudin 15 1.00059
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2 0.969142
OSBPL6 oxysterol binding protein-like 6 0.969142
CNTNAP2 contactin associated protein-like 2 0.942765
CCND2 cyclin D2 0.942765
PDZRN3 PDZ domain containing ring finger 3 0.942765
CLDN14 claudin 14 0.919744
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.899912
FOXP1 forkhead box P1 0.899912
LDB2 LIM domain binding 2 0.882984
PRKCE protein kinase C, epsilon 0.868241
ADAMTSL1 ADAMTS-like 1 0.868241
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.868241
FGF14 fibroblast growth factor 14 0.868241
GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 0.868241
MBP myelin basic protein 0.855449
CREBBP CREB binding protein 0.855449
NME7 NME/NM23 family member 7 0.845939
NUAK1 NUAK family, SNF1-like kinase, 1 0.845831
UNC13C unc-13 homolog C (C. elegans) 0.845086
FRMD6 FERM domain containing 6 0.844241
NCOA2 nuclear receptor coactivator 2 0.823019
NKX2-5 NK2 homeobox 5 0.758788
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila) 0.721344
AJAP1 adherens junctions associated protein 1 0.697346
PACSIN1 protein kinase C and casein kinase substrate in neurons 1 0.682533
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.643425
SOX5 SRY (sex determining region Y)-box 5 0.624461
TUSC3 tumor suppressor candidate 3 0.62227
CORIN corin, serine peptidase 0.571756
C11ORF21 chromosome 11 open reading frame 21 0.545167
USP31 ubiquitin specific peptidase 31 0.54245
TCEA3 transcription elongation factor A (SII), 3 0.533704
LPP LIM domain containing preferred translocation partner in lipoma 0.530515
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5 0.483588
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 0.462619
ASTN1 astrotactin 1 0.46012
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.453036
AKAP6 A kinase (PRKA) anchor protein 6 0.447717
LYRM4 LYR motif containing 4 0.447009