rough endoplasmic reticulum Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae. (Gene Ontology, GO_0005791)
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51 proteins localized to the rough endoplasmic reticulum cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SPPL3 signal peptide peptidase like 3 0.663342
MYOC myocilin, trabecular meshwork inducible glucocorticoid response 0.663342
FKRP fukutin related protein 0.663342
TMEM97 transmembrane protein 97 0.663342
RAB14 RAB14, member RAS oncogene family 0.663342
PTGDS prostaglandin D2 synthase 21kDa (brain) 0.663342
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.663342
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.663342
PSEN1 presenilin 1 0.663342
HM13 histocompatibility (minor) 13 0.663342
SSR4 signal sequence receptor, delta 0.663342
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.663342
EPHA5 EPH receptor A5 0.663342
PI4KB phosphatidylinositol 4-kinase, catalytic, beta 0.663342
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 0.663342
CA4 carbonic anhydrase IV 0.237908
SEC61B Sec61 beta subunit 0.237908
SEC62 SEC62 homolog (S. cerevisiae) 0.237908
STAU1 staufen double-stranded RNA binding protein 1 0.237908
RPN1 ribophorin I 0.237908
SRP9P1 signal recognition particle 9 pseudogene 1 0.237908
RANGRF RAN guanine nucleotide release factor 0.237908
SRP9 signal recognition particle 9kDa 0.237908
SRPR signal recognition particle receptor (docking protein) 0.237908
SUCO SUN domain containing ossification factor 0.237908
LRAT lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) 0.237908
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.03318
LRPAP1 low density lipoprotein receptor-related protein associated protein 1 0.03318
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.03318
RESP18 regulated endocrine-specific protein 18 0.03318
AQP2 aquaporin 2 (collecting duct) 0.03318
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.03318
RHO rhodopsin 0.03318
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3 0.03318
GLUL glutamate-ammonia ligase 0.03318
RPN2 ribophorin II 0.03318
PCSK9 proprotein convertase subtilisin/kexin type 9 0.03318
HGFAC HGF activator 0.03318
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.03318
RP9 retinitis pigmentosa 9 (autosomal dominant) 0.03318
ARSB arylsulfatase B 0.03318
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.03318
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) 0.03318
BGLAP bone gamma-carboxyglutamate (gla) protein 0.03318
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2 0.03318
MTTP microsomal triglyceride transfer protein 0.03318
NCF1C neutrophil cytosolic factor 1C pseudogene 0.03318
NCF1 neutrophil cytosolic factor 1 0.03318
CYBB cytochrome b-245, beta polypeptide 0.03318
HTR5A 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled 0.03318
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.03318