root Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
Description The usually underground part of a seed plant body that originates usually from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support, and differs from a stem especially in lacking nodes, buds, and leaves. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001188)
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Genes

71 genes with high or low expression in root relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value

low expression

Symbol Name Standardized Value
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 -2.42574
RHBG Rh family, B glycoprotein (gene/pseudogene) -2.41767
SLC13A1 solute carrier family 13 (sodium/sulfate symporter), member 1 -2.16863
SLC26A1 solute carrier family 26 (anion exchanger), member 1 -2.14082
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 -2.08593
MIS18BP1 MIS18 binding protein 1 -2.01012
ZDHHC12 zinc finger, DHHC-type containing 12 -1.86902
FFAR2 free fatty acid receptor 2 -1.86477
BATF3 basic leucine zipper transcription factor, ATF-like 3 -1.77926
BNIPL BCL2/adenovirus E1B 19kD interacting protein like -1.75594
RCCD1 RCC1 domain containing 1 -1.74084
MYH7 myosin, heavy chain 7, cardiac muscle, beta -1.66015
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 -1.62572
FLT3LG fms-related tyrosine kinase 3 ligand -1.60915
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 -1.53924
DSCAM Down syndrome cell adhesion molecule -1.53794
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated -1.49992
PPP1R3A protein phosphatase 1, regulatory subunit 3A -1.49427
SLC25A43 solute carrier family 25, member 43 -1.49125
ZNF394 zinc finger protein 394 -1.45668
KISS1R KISS1 receptor -1.4531
BIRC3 baculoviral IAP repeat containing 3 -1.43792
RHCG Rh family, C glycoprotein -1.3912
NCAPG2 non-SMC condensin II complex, subunit G2 -1.37916
CFI complement factor I -1.37339
SLC39A11 solute carrier family 39, member 11 -1.35054
CLEC4A C-type lectin domain family 4, member A -1.33638
CASC1 cancer susceptibility candidate 1 -1.33264
TAAR5 trace amine associated receptor 5 -1.32618
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) -1.31235
GPR55 G protein-coupled receptor 55 -1.30871
WDR72 WD repeat domain 72 -1.30095
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13 -1.2952
MGAM maltase-glucoamylase -1.291
DTL denticleless E3 ubiquitin protein ligase homolog (Drosophila) -1.28661
ICAM1 intercellular adhesion molecule 1 -1.25138
ADGRF1 adhesion G protein-coupled receptor F1 -1.24702
CLEC4M C-type lectin domain family 4, member M -1.23893
ACSM5 acyl-CoA synthetase medium-chain family member 5 -1.23838
PRKCA protein kinase C, alpha -1.23459
MYO15A myosin XVA -1.23257
EHF ets homologous factor -1.20542
RPE65 retinal pigment epithelium-specific protein 65kDa -1.20076
P2RY1 purinergic receptor P2Y, G-protein coupled, 1 -1.17243
IL13RA2 interleukin 13 receptor, alpha 2 -1.15807
LIMK1 LIM domain kinase 1 -1.15393
YDJC YdjC homolog (bacterial) -1.13631
DAPL1 death associated protein-like 1 -1.12174
TCTEX1D1 Tctex1 domain containing 1 -1.11399
IRF6 interferon regulatory factor 6 -1.10944
BAIAP2L2 BAI1-associated protein 2-like 2 -1.09877
LAD1 ladinin 1 -1.08947
CD300LF CD300 molecule-like family member f -1.08875
MOB3A MOB kinase activator 3A -1.08253
ZNF658 zinc finger protein 658 -1.07636
R3HDML R3H domain containing-like -1.07061
KLRD1 killer cell lectin-like receptor subfamily D, member 1 -1.06547
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1 -1.05586
IL18RAP interleukin 18 receptor accessory protein -1.05244
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13 -1.04589
LSM12 LSM12 homolog (S. cerevisiae) -1.03519
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 -1.03228
IGSF23 immunoglobulin superfamily, member 23 -1.03216
MLANA melan-A -1.02771
HAUS6 HAUS augmin-like complex, subunit 6 -1.02646
SAMD3 sterile alpha motif domain containing 3 -1.01661
TSGA13 testis specific, 13 -1.01306
ZNF551 zinc finger protein 551 -1.01138
PRPF4 pre-mRNA processing factor 4 -1.01056
LOC730159 uncharacterized LOC730159 -1.00819
HOXD10 homeobox D10 -1.00314