root hair Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A long, thin projection from a root epidermal cell that contains F-actin and tubulin, and a cell wall. (Gene Ontology, GO_0035618)
Similar Terms
Downloads & Tools

Genes

102 proteins co-occuring with the root hair cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ATN1 atrophin 1 3.94445
HMGA2 high mobility group AT-hook 2 1.79045
GUSB glucuronidase, beta 1.46552
ZFP62 ZFP62 zinc finger protein 1.27611
NLRC3 NLR family, CARD domain containing 3 1.11888
NIN ninein (GSK3B interacting protein) 1.03078
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4 0.992693
ERN2 endoplasmic reticulum to nucleus signaling 2 0.952096
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.826336
FAM3A family with sequence similarity 3, member A 0.813946
KRT24 keratin 24, type I 0.811193
EXOC7 exocyst complex component 7 0.790564
NUP133 nucleoporin 133kDa 0.789649
NUP85 nucleoporin 85kDa 0.749094
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.693393
MNX1 motor neuron and pancreas homeobox 1 0.69164
WDR1 WD repeat domain 1 0.682899
ASPG asparaginase 0.656033
SP7 Sp7 transcription factor 0.648721
SH2D3A SH2 domain containing 3A 0.631171
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) 0.620529
MED8 mediator complex subunit 8 0.617557
IGSF9 immunoglobulin superfamily, member 9 0.616709
RND1 Rho family GTPase 1 0.609509
NFYC nuclear transcription factor Y, gamma 0.604862
RTN4R reticulon 4 receptor 0.602752
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.600644
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.586361
KLK15 kallikrein-related peptidase 15 0.576747
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 0.574662
MYB v-myb avian myeloblastosis viral oncogene homolog 0.562187
ATL1 atlastin GTPase 1 0.558457
CACNA1B calcium channel, voltage-dependent, N type, alpha 1B subunit 0.53454
GNL1 guanine nucleotide binding protein-like 1 0.52716
INPP1 inositol polyphosphate-1-phosphatase 0.523476
CEP131 centrosomal protein 131kDa 0.517348
RHAG Rh-associated glycoprotein 0.517348
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.51694
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 0.500664
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6 0.471609
RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 0.470406
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b 0.465998
TP63 tumor protein p63 0.464397
AGK acylglycerol kinase 0.455214
ERH enhancer of rudimentary homolog (Drosophila) 0.447656
PFN1 profilin 1 0.429859
CDKN2A cyclin-dependent kinase inhibitor 2A 0.428284
MGAM maltase-glucoamylase 0.41182
PNMA2 paraneoplastic Ma antigen 2 0.403637
NCKAP1 NCK-associated protein 1 0.403248
AGPS alkylglycerone phosphate synthase 0.388523
MINK1 misshapen-like kinase 1 0.378122
PTDSS1 phosphatidylserine synthase 1 0.376202
SEH1L SEH1-like (S. cerevisiae) 0.375818
SCP2 sterol carrier protein 2 0.365477
PLEK pleckstrin 0.339261
ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c 0.325327
PFN4 profilin family, member 4 0.324951
PFN2 profilin 2 0.311105
SELENBP1 selenium binding protein 1 0.310732
BTNL2 butyrophilin-like 2 0.306632
AMT aminomethyltransferase 0.303283
GRHL1 grainyhead-like 1 (Drosophila) 0.298826
ERN1 endoplasmic reticulum to nucleus signaling 1 0.297342
SDHAF2 succinate dehydrogenase complex assembly factor 2 0.294748
MGP matrix Gla protein 0.291787
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2 0.290308
FPGS folylpolyglutamate synthase 0.289569
RB1 retinoblastoma 1 0.288091
EXOC5 exocyst complex component 5 0.282558
UGDH UDP-glucose 6-dehydrogenase 0.277038
PCTP phosphatidylcholine transfer protein 0.266042
SQLE squalene epoxidase 0.262755
DNAH8 dynein, axonemal, heavy chain 8 0.262755
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 0.256561
GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 0.255107
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.253653
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.253291
PIKFYVE phosphoinositide kinase, FYVE finger containing 0.250751
NMS neuromedin S 0.232744
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.222083
LAX1 lymphocyte transmembrane adaptor 1 0.216111
FER fer (fps/fes related) tyrosine kinase 0.213669
H2AFZ H2A histone family, member Z 0.213322
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion 0.207794
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.205059
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 0.204718
EXOC6 exocyst complex component 6 0.204378
ALK anaplastic lymphoma receptor tyrosine kinase 0.199659
A4GALT alpha 1,4-galactosyltransferase 0.198325
PVR poliovirus receptor 0.196339
CLPS colipase, pancreatic 0.192746
RBMS1 RNA binding motif, single stranded interacting protein 1 0.190814
SPTBN1 spectrin, beta, non-erythrocytic 1 0.187333
EXOC2 exocyst complex component 2 0.183025
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.181524
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.18093
ACSL1 acyl-CoA synthetase long-chain family member 1 0.179459
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.176587
FMN1 formin 1 0.160254
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.158502
MOGS mannosyl-oligosaccharide glucosidase 0.156863