rna polymerase complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits. (Gene Ontology, GO_0030880)
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336 proteins co-occuring with the rna polymerase complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 2.12822
CTR9 CTR9, Paf1/RNA polymerase II complex component 1.90979
CDC73 cell division cycle 73 1.86211
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) 1.81445
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 1.78386
LDHB lactate dehydrogenase B 1.52823
PGM1 phosphoglucomutase 1 1.41362
PEPD peptidase D 1.40802
PGM2 phosphoglucomutase 2 1.33033
ACP1 acid phosphatase 1, soluble 1.25864
LAP3 leucine aminopeptidase 3 1.19365
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 1.18286
PGM3 phosphoglucomutase 3 1.16542
HIST2H2BF histone cluster 2, H2bf 1.09391
HIST1H2BH histone cluster 1, H2bh 1.09391
HIST1H2BD histone cluster 1, H2bd 1.09391
HIST3H2BB histone cluster 3, H2bb 1.09391
HIST1H2BC histone cluster 1, H2bc 1.09187
HIST1H2BF histone cluster 1, H2bf 1.09187
HIST1H2BA histone cluster 1, H2ba 1.09035
PMS2P5 postmeiotic segregation increased 2 pseudogene 5 0.995632
DICER1 dicer 1, ribonuclease type III 0.977104
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) 0.956395
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.923728
INTS6 integrator complex subunit 6 0.917177
GLO1 glyoxalase I 0.902745
CDK8 cyclin-dependent kinase 8 0.901818
SETD1A SET domain containing 1A 0.881938
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.868586
H3F3B H3 histone, family 3B (H3.3B) 0.863988
H3F3A H3 histone, family 3A 0.863988
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 0.852961
LDHA lactate dehydrogenase A 0.845155
RBP7 retinol binding protein 7, cellular 0.835974
PGD phosphogluconate dehydrogenase 0.789191
RPAP2 RNA polymerase II associated protein 2 0.766804
MPI mannose phosphate isomerase 0.755891
INTS7 integrator complex subunit 7 0.752263
CREBBP CREB binding protein 0.743671
INTS12 integrator complex subunit 12 0.731076
CFAP20 cilia and flagella associated protein 20 0.728836
INTS1 integrator complex subunit 1 0.715014
CCNC cyclin C 0.707039
HIPK4 homeodomain interacting protein kinase 4 0.693393
INTS4 integrator complex subunit 4 0.689888
MED12 mediator complex subunit 12 0.682027
GTF2B general transcription factor IIB 0.656464
AK1 adenylate kinase 1 0.653019
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.641429
SETD2 SET domain containing 2 0.633305
CITED4 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 0.630318
POLR2G polymerase (RNA) II (DNA directed) polypeptide G 0.630318
SUPT7L suppressor of Ty 7 (S. cerevisiae)-like 0.625632
NKX2-8 NK2 homeobox 8 0.623504
MIR192 microRNA 192 0.622229
TRPV1 transient receptor potential cation channel, subfamily V, member 1 0.619255
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.606128
CHD1 chromodomain helicase DNA binding protein 1 0.604862
CPSF3L cleavage and polyadenylation specific factor 3-like 0.602752
SORD sorbitol dehydrogenase 0.598117
OR1E1 olfactory receptor, family 1, subfamily E, member 1 0.590973
INTS3 integrator complex subunit 3 0.580504
INTS5 integrator complex subunit 5 0.575078
NUPR1 nuclear protein, transcriptional regulator, 1 0.572994
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) 0.562602
INIP INTS3 and NABP interacting protein 0.5597
SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 0.557214
ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 0.555973
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) 0.552251
PBRM1 polybromo 1 0.549773
FUCA1 fucosidase, alpha-L- 1, tissue 0.54771
ABHD16A abhydrolase domain containing 16A 0.545236
SLC39A3 solute carrier family 39 (zinc transporter), member 3 0.541529
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.536594
AK2 adenylate kinase 2 0.536183
ENO1 enolase 1, (alpha) 0.535772
PTBP2 polypyrimidine tract binding protein 2 0.53454
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.532898
CTSW cathepsin W 0.532488
AK3 adenylate kinase 3 0.532488
PTER phosphotriesterase related 0.530438
POLI polymerase (DNA directed) iota 0.52675
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 0.523067
GRN granulin 0.519389
IL19 interleukin 19 0.499042
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3 0.497015
TRIP4 thyroid hormone receptor interactor 4 0.497015
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 0.491348
SESTD1 SEC14 and spectrin domains 1 0.484886
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 0.481661
PEBP1 phosphatidylethanolamine binding protein 1 0.477233
CDK19 cyclin-dependent kinase 19 0.474018
ESD esterase D 0.471609
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.463997
NCOA1 nuclear receptor coactivator 1 0.462798
PRTG protogenin 0.461599
MED13 mediator complex subunit 13 0.461199
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.443292
INTS9 integrator complex subunit 9 0.437751
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.421997
RDM1 RAD52 motif containing 1 0.420428
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 0.418468
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.417685
TPH1 tryptophan hydroxylase 1 0.412992
MED17 mediator complex subunit 17 0.410649
SLC6A16 solute carrier family 6, member 16 0.401693
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 0.392388
RANBP10 RAN binding protein 10 0.388909
NLRP4 NLR family, pyrin domain containing 4 0.386593
WNK3 WNK lysine deficient protein kinase 3 0.383509
GPT glutamic-pyruvate transaminase (alanine aminotransferase) 0.374283
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13 0.371599
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 0.370833
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2 0.370067
MED16 mediator complex subunit 16 0.367771
SLC39A1 solute carrier family 39 (zinc transporter), member 1 0.367771
PXK PX domain containing serine/threonine kinase 0.365477
STK16 serine/threonine kinase 16 0.361659
PNP purine nucleoside phosphorylase 0.360515
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12 0.358609
GRIA3 glutamate receptor, ionotropic, AMPA 3 0.354422
LHX9 LIM homeobox 9 0.353662
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 0.352901
FOXE3 forkhead box E3 0.351762
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 0.339261
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.337373
POLR1D polymerase (RNA) I polypeptide D, 16kDa 0.336241
GSR glutathione reductase 0.333225
TWF2 twinfilin actin binding protein 2 0.332848
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 0.330589
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.328708
OSBP2 oxysterol binding protein 2 0.328708
ADK adenosine kinase 0.326829
HELZ helicase with zinc finger 0.326453
INPP5J inositol polyphosphate-5-phosphatase J 0.324201
TRPV2 transient receptor potential cation channel, subfamily V, member 2 0.323825
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 0.319328
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 0.317456
TRRAP transformation/transcription domain-associated protein 0.311105
ELL elongation factor RNA polymerase II 0.307749
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 0.307004
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 0.305888
OR1J2 olfactory receptor, family 1, subfamily J, member 2 0.304771
RGS9BP regulator of G protein signaling 9 binding protein 0.30254
GSTK1 glutathione S-transferase kappa 1 0.301425
OSBPL8 oxysterol binding protein-like 8 0.301425
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.301425
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11 0.300311
GPBAR1 G protein-coupled bile acid receptor 1 0.299197
GJB5 gap junction protein, beta 5, 31.1kDa 0.296972
JAG2 jagged 2 0.296601
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5 0.29623
CCAR2 cell cycle and apoptosis regulator 2 0.29623
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 0.294748
OSBPL3 oxysterol binding protein-like 3 0.294007
DAZAP2 DAZ associated protein 2 0.294007
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 0.293637
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.291417
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1 0.289938
IKZF3 IKAROS family zinc finger 3 (Aiolos) 0.289938
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa 0.288091
PRTN3 proteinase 3 0.286614
MED15 mediator complex subunit 15 0.285876
CARM1 coactivator-associated arginine methyltransferase 1 0.285138
MESP1 mesoderm posterior basic helix-loop-helix transcription factor 1 0.277774
ELF5 E74-like factor 5 (ets domain transcription factor) 0.277774
PCP2 Purkinje cell protein 2 0.277774
GLA galactosidase, alpha 0.272633
HIPK1 homeodomain interacting protein kinase 1 0.272267
WDR61 WD repeat domain 61 0.269701
NPW neuropeptide W 0.269701
HEXA hexosaminidase A (alpha polypeptide) 0.268237
CDK9 cyclin-dependent kinase 9 0.267139
SMYD3 SET and MYND domain containing 3 0.266408
F13B coagulation factor XIII, B polypeptide 0.262755
NABP2 nucleic acid binding protein 2 0.26166
GBA2 glucosidase, beta (bile acid) 2 0.260202
SPIB Spi-B transcription factor (Spi-1/PU.1 related) 0.259837
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa 0.258381
VIP vasoactive intestinal peptide 0.256561
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.25547
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 0.252927
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.251114
HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 0.249302
PHF6 PHD finger protein 6 0.24894
CKB creatine kinase, brain 0.24894
INS insulin 0.24713
TBP TATA box binding protein 0.245323
PIGC phosphatidylinositol glycan anchor biosynthesis, class C 0.244601
SART1 squamous cell carcinoma antigen recognized by T cells 0.241716
IPO5 importin 5 0.236324
MDH1 malate dehydrogenase 1, NAD (soluble) 0.232386
G6PC2 glucose-6-phosphatase, catalytic, 2 0.232386
GPI glucose-6-phosphate isomerase 0.227752
RANBP9 RAN binding protein 9 0.227397
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.226686
AFF1 AF4/FMR2 family, member 1 0.226331
MIR21 microRNA 21 0.224204
ADORA2B adenosine A2b receptor 0.221378
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 0.215761
RNF20 ring finger protein 20, E3 ubiquitin protein ligase 0.213322
STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 0.212974
G6PC3 glucose 6 phosphatase, catalytic, 3 0.208825
SOD2 superoxide dismutase 2, mitochondrial 0.208825
PYCR1 pyrroline-5-carboxylate reductase 1 0.207108
CAPRIN1 cell cycle associated protein 1 0.203699
ATF5 activating transcription factor 5 0.203022
AFM afamin 0.202009
TRAPPC10 trafficking protein particle complex 10 0.198325
HIPK3 homeodomain interacting protein kinase 3 0.198325
TUBG1 tubulin, gamma 1 0.196999
TP53 tumor protein p53 0.196339
KAT2B K(lysine) acetyltransferase 2B 0.196339
HAGH hydroxyacylglutathione hydrolase 0.19601
RGS7BP regulator of G-protein signaling 7 binding protein 0.19601
PAX9 paired box 9 0.195025
AFF4 AF4/FMR2 family, member 4 0.195025
CLDN2 claudin 2 0.191456
CSN1S1 casein alpha s1 0.189222
TPSG1 tryptase gamma 1 0.188274
SFTPA2 surfactant protein A2 0.184241
SMAD5 SMAD family member 5 0.184241
TADA3 transcriptional adaptor 3 0.183328
ZFP36 ZFP36 ring finger protein 0.180339
CLCNKB chloride channel, voltage-sensitive Kb 0.176587
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.173814
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 0.173814
LHX2 LIM homeobox 2 0.17141
G6PD glucose-6-phosphate dehydrogenase 0.17141
PKM pyruvate kinase, muscle 0.170371
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.169859
TRPV4 transient receptor potential cation channel, subfamily V, member 4 0.169099
RBBP9 retinoblastoma binding protein 9 0.167856
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 0.166643
HCRTR1 hypocretin (orexin) receptor 1 0.166643
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4 0.166405
ANKK1 ankyrin repeat and kinase domain containing 1 0.16477
DACH1 dachshund family transcription factor 1 0.164089
MAF1 MAF1 homolog (S. cerevisiae) 0.1632
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 0.160863
PRKCA protein kinase C, alpha 0.159268
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 0.158315
GUK1 guanylate kinase 1 0.158315
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.156513
ACO2 aconitase 2, mitochondrial 0.137578
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 0.136036
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.135237
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.133818
RNASEH2A ribonuclease H2, subunit A 0.133397
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 0.131734
ACO1 aconitase 1, soluble 0.13016
ADA adenosine deaminase 0.129629
FOXO1 forkhead box O1 0.129357
SHD Src homology 2 domain containing transforming protein D 0.12917
CYTH2 cytohesin 2 0.128998
GAS1 growth arrest-specific 1 0.128973
CRH corticotropin releasing hormone 0.12888
NPY neuropeptide Y 0.128805
PEG3 paternally expressed 3 0.128634
HBD hemoglobin, delta 0.127602
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 0.12756
MIER1 mesoderm induction early response 1, transcriptional regulator 0.127532
LALBA lactalbumin, alpha- 0.127147
TERT telomerase reverse transcriptase 0.12706
A2M alpha-2-macroglobulin 0.126972
TPI1 triosephosphate isomerase 1 0.126644
TGM1 transglutaminase 1 0.126599
GANC glucosidase, alpha; neutral C 0.125992
SCN2A sodium channel, voltage gated, type II alpha subunit 0.125799
C5AR1 complement component 5a receptor 1 0.125783
NT5C 5', 3'-nucleotidase, cytosolic 0.125353
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.125353
BDH1 3-hydroxybutyrate dehydrogenase, type 1 0.124544
ENO2 enolase 2 (gamma, neuronal) 0.124499
ABHD14A abhydrolase domain containing 14A 0.124133
PGK1 phosphoglycerate kinase 1 0.124021
RAP1B RAP1B, member of RAS oncogene family 0.123765
GRM7 glutamate receptor, metabotropic 7 0.123582
BDKRB2 bradykinin receptor B2 0.123524
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 0.123108
HBB hemoglobin, beta 0.12274
TALDO1 transaldolase 1 0.122147
CFB complement factor B 0.121548
CLPS colipase, pancreatic 0.121457
GPANK1 G patch domain and ankyrin repeats 1 0.121321
FGF19 fibroblast growth factor 19 0.121286
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 0.120636
LDLR low density lipoprotein receptor 0.120319
FH fumarate hydratase 0.119712
PAH phenylalanine hydroxylase 0.119399
CTSE cathepsin E 0.118973
NANOG Nanog homeobox 0.118754
STAB2 stabilin 2 0.118727
TK1 thymidine kinase 1, soluble 0.118589
CDX1 caudal type homeobox 1 0.118053
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.117675
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.117527
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.117409
EOMES eomesodermin 0.117394
B2M beta-2-microglobulin 0.117304
TRPM3 transient receptor potential cation channel, subfamily M, member 3 0.116985
GNB5 guanine nucleotide binding protein (G protein), beta 5 0.116831
CRK v-crk avian sarcoma virus CT10 oncogene homolog 0.116393
WNK4 WNK lysine deficient protein kinase 4 0.116138
BIK BCL2-interacting killer (apoptosis-inducing) 0.116074
ALB albumin 0.115731
TRPM8 transient receptor potential cation channel, subfamily M, member 8 0.115365
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 0.115113
CDK11A cyclin-dependent kinase 11A 0.114941
XPO5 exportin 5 0.114734
CCNH cyclin H 0.114665
DRD2 dopamine receptor D2 0.114453
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.114312
ERG v-ets avian erythroblastosis virus E26 oncogene homolog 0.114171
PIF1 PIF1 5'-to-3' DNA helicase 0.114026
MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.114026
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.113863
SMAD9 SMAD family member 9 0.113809
LMX1B LIM homeobox transcription factor 1, beta 0.113737
FOS FBJ murine osteosarcoma viral oncogene homolog 0.113701
CCR2 chemokine (C-C motif) receptor 2 0.113515
CDK4 cyclin-dependent kinase 4 0.113497
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.092347
HTRA1 HtrA serine peptidase 1 0.091533
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.091533
CA2 carbonic anhydrase II 0.09009
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 0.088538
GC group-specific component (vitamin D binding protein) 0.088501
MMP11 matrix metallopeptidase 11 0.087938
AHSG alpha-2-HS-glycoprotein 0.08756
ACP2 acid phosphatase 2, lysosomal 0.087255
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.086645
DSPP dentin sialophosphoprotein 0.085835
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.085367
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.084702
HPX hemopexin 0.083752