renal neoplasm Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description Tumors or cancers of the KIDNEY. (Experimental Factor Ontology, EFO_0003865)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0009726
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Genes

83 genes associated with the renal neoplasm phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
DLG2 discs, large homolog 2 (Drosophila) 1.37768
TCN2 transcobalamin II 0.99234
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.719731
EPAS1 endothelial PAS domain protein 1 0.676552
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.602587
ZEB2 zinc finger E-box binding homeobox 2 0.542759
SCARB1 scavenger receptor class B, member 1 0.530444
PCSK9 proprotein convertase subtilisin/kexin type 9 0.495598
PDZD2 PDZ domain containing 2 0.429354
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.410087
CEP85L centrosomal protein 85kDa-like 0.406588
USP10 ubiquitin specific peptidase 10 0.405267
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 0.405267
TMEM44 transmembrane protein 44 0.404726
KAT2B K(lysine) acetyltransferase 2B 0.40409
LINC00189 long intergenic non-protein coding RNA 189 0.403073
DCC DCC netrin 1 receptor 0.402177
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.401518
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.400885
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 0.400586
OGFRL1 opioid growth factor receptor-like 1 0.399557
FRMD8 FERM domain containing 8 0.399429
ASCC2 activating signal cointegrator 1 complex subunit 2 0.398365
PCSK6 proprotein convertase subtilisin/kexin type 6 0.397987
IQSEC3 IQ motif and Sec7 domain 3 0.396981
MAN1B1 mannosidase, alpha, class 1B, member 1 0.395556
LOC146513 uncharacterized LOC146513 0.395332
SHROOM3 shroom family member 3 0.395332
MIR99AHG mir-99a-let-7c cluster host gene 0.395288
CNTN4 contactin 4 0.395027
ZMYND15 zinc finger, MYND-type containing 15 0.394816
TTYH1 tweety family member 1 0.393904
LOC100507195 uncharacterized LOC100507195 0.393755
BTNL2 butyrophilin-like 2 0.392364
ALKBH6 alkB, alkylation repair homolog 6 (E. coli) 0.391575
DOCK1 dedicator of cytokinesis 1 0.391047
CLIP3 CAP-GLY domain containing linker protein 3 0.390445
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.390157
PTPRO protein tyrosine phosphatase, receptor type, O 0.387927
PAQR5 progestin and adipoQ receptor family member V 0.387866
GPA33 glycoprotein A33 (transmembrane) 0.387836
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.38742
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2 0.387102
SP100 SP100 nuclear antigen 0.386933
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6 0.386738
GTSF1 gametocyte specific factor 1 0.386091
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 0.385909
FAM13A family with sequence similarity 13, member A 0.385628
DPH6 diphthamine biosynthesis 6 0.385478
FOXP1 forkhead box P1 0.384728
MRPL23 mitochondrial ribosomal protein L23 0.384728
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.384177
PPA2 pyrophosphatase (inorganic) 2 0.382881
PARK2 parkin RBR E3 ubiquitin protein ligase 0.380955
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.380918
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 0.380825
PITPNM3 PITPNM family member 3 0.38077
DOCK5 dedicator of cytokinesis 5 0.380515
CDH23 cadherin-related 23 0.380283
DGKI diacylglycerol kinase, iota 0.379882
TMEM222 transmembrane protein 222 0.379813
CEP128 centrosomal protein 128kDa 0.379543
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila) 0.378954
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) 0.37889
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1 0.378716
AADACL3 arylacetamide deacetylase-like 3 0.378591
ARID1A AT rich interactive domain 1A (SWI-like) 0.378014
INSC inscuteable homolog (Drosophila) 0.377837
LOXHD1 lipoxygenase homology domains 1 0.37759
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase 0.377561
MTHFR methylenetetrahydrofolate reductase (NAD(P)H) 0.377376
SLIT3 slit homolog 3 (Drosophila) 0.377278
MROH2A maestro heat-like repeat family member 2A 0.377222
RAI1 retinoic acid induced 1 0.377166
MTUS1 microtubule associated tumor suppressor 1 0.376945
ADGRB3 adhesion G protein-coupled receptor B3 0.376931
SASH1 SAM and SH3 domain containing 1 0.376648
ONECUT2 one cut homeobox 2 0.376541
GPR17 G protein-coupled receptor 17 0.376528
AXIN2 axin 2 0.369969
ZC3HC1 zinc finger, C3HC-type containing 1 0.366942
DNAH12 dynein, axonemal, heavy chain 12 0.356673
TMEM132D transmembrane protein 132D 0.347507