r2 part of basolateral reticular formation Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
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Genes

300 genes with high or low expression in r2 part of basolateral reticular formation relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
PGM3 phosphoglucomutase 3 2.77122
MNX1 motor neuron and pancreas homeobox 1 2.11378
CLEC12B C-type lectin domain family 12, member B 2.11319
TFF3 trefoil factor 3 (intestinal) 1.97009
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1.92868
RNMTL1 RNA methyltransferase like 1 1.74893
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2 1.73661
PHIP pleckstrin homology domain interacting protein 1.66911
ARMCX6 armadillo repeat containing, X-linked 6 1.65572
HEXDC hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing 1.64959
KRT16 keratin 16, type I 1.56988
ZNHIT1 zinc finger, HIT-type containing 1 1.47327
OVGP1 oviductal glycoprotein 1, 120kDa 1.46762
RETSAT retinol saturase (all-trans-retinol 13,14-reductase) 1.46738
DCAF12 DDB1 and CUL4 associated factor 12 1.45267
MAOA monoamine oxidase A 1.42343
EIF1AX eukaryotic translation initiation factor 1A, X-linked 1.40842
TCAIM T cell activation inhibitor, mitochondrial 1.40324
GBP2 guanylate binding protein 2, interferon-inducible 1.39374
SC5D sterol-C5-desaturase 1.38608
KIF12 kinesin family member 12 1.36838
AP1G2 adaptor-related protein complex 1, gamma 2 subunit 1.36399
SNRPB2 small nuclear ribonucleoprotein polypeptide B 1.36076
SCGB3A1 secretoglobin, family 3A, member 1 1.34627
HDDC2 HD domain containing 2 1.34296
STAT2 signal transducer and activator of transcription 2, 113kDa 1.32933
DCTN3 dynactin 3 (p22) 1.31677
RPA2 replication protein A2, 32kDa 1.31076
DTX3L deltex 3 like, E3 ubiquitin ligase 1.30404
ARHGAP15 Rho GTPase activating protein 15 1.29442
IDI1 isopentenyl-diphosphate delta isomerase 1 1.29376
PLAU plasminogen activator, urokinase 1.29069
KCTD21 potassium channel tetramerization domain containing 21 1.28955
SKAP2 src kinase associated phosphoprotein 2 1.28573
FIGF c-fos induced growth factor (vascular endothelial growth factor D) 1.27264
PDE12 phosphodiesterase 12 1.27099
RRAGA Ras-related GTP binding A 1.26664
TTC9C tetratricopeptide repeat domain 9C 1.26156
ISPD isoprenoid synthase domain containing 1.25751
DACH2 dachshund family transcription factor 2 1.24472
SPX spexin hormone 1.24308
TTC23L tetratricopeptide repeat domain 23-like 1.23546
MCAM melanoma cell adhesion molecule 1.23054
TEX35 testis expressed 35 1.22632
PIF1 PIF1 5'-to-3' DNA helicase 1.22226
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 1.22223
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 1.22055
ORAI1 ORAI calcium release-activated calcium modulator 1 1.22003
BATF basic leucine zipper transcription factor, ATF-like 1.21075
ESD esterase D 1.20474
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 1.19438
APOA2 apolipoprotein A-II 1.19199
PPP2R2D protein phosphatase 2, regulatory subunit B, delta 1.19035
OSGIN2 oxidative stress induced growth inhibitor family member 2 1.18418
RANBP1 RAN binding protein 1 1.16697
SEC23A Sec23 homolog A (S. cerevisiae) 1.16572
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 1.14848
ZCRB1 zinc finger CCHC-type and RNA binding motif 1 1.14415
RAB33B RAB33B, member RAS oncogene family 1.129
NINJ1 ninjurin 1 1.12759
TRIM7 tripartite motif containing 7 1.12665
DENR density-regulated protein 1.12633
ZMAT2 zinc finger, matrin-type 2 1.1255
SYCP2 synaptonemal complex protein 2 1.12506
CREBL2 cAMP responsive element binding protein-like 2 1.12408
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 1.12298
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 1.12257
APMAP adipocyte plasma membrane associated protein 1.12218
BOD1 biorientation of chromosomes in cell division 1 1.11961
ZNF420 zinc finger protein 420 1.11649
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 1.11366
NIPBL Nipped-B homolog (Drosophila) 1.10415
AKTIP AKT interacting protein 1.1021
ZC2HC1A zinc finger, C2HC-type containing 1A 1.09432
CACYBP calcyclin binding protein 1.09389
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3 1.09112
TECR trans-2,3-enoyl-CoA reductase 1.08982
BCL2L13 BCL2-like 13 (apoptosis facilitator) 1.08647
FNDC8 fibronectin type III domain containing 8 1.08478
SVOPL SVOP-like 1.08272
ACHE acetylcholinesterase (Yt blood group) 1.08202
RPL28 ribosomal protein L28 1.07972
LARP4 La ribonucleoprotein domain family, member 4 1.07866
SPATA33 spermatogenesis associated 33 1.07765
TANGO6 transport and golgi organization 6 homolog (Drosophila) 1.07628
COPRS coordinator of PRMT5, differentiation stimulator 1.0752
EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 1.07304
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha 1.07165
RNF220 ring finger protein 220 1.07142
STX17 syntaxin 17 1.06962
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 1.06782
REG3A regenerating islet-derived 3 alpha 1.06697
SRP54 signal recognition particle 54kDa 1.06561
STK32A serine/threonine kinase 32A 1.06378
VPS33B vacuolar protein sorting 33 homolog B (yeast) 1.06309
CRIP3 cysteine-rich protein 3 1.06274
TONSL tonsoku-like, DNA repair protein 1.06106
MRPL18 mitochondrial ribosomal protein L18 1.06005
EIF4E2 eukaryotic translation initiation factor 4E family member 2 1.05956
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial 1.05866
SAE1 SUMO1 activating enzyme subunit 1 1.05726
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 1.05103
METTL10 methyltransferase like 10 1.04727
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 1.04222
TMEM41B transmembrane protein 41B 1.03788
DOCK11 dedicator of cytokinesis 11 1.03094
DIS3L DIS3 like exosome 3'-5' exoribonuclease 1.02486
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 1.02227
NSG1 neuron specific gene family member 1 1.0195
USP9X ubiquitin specific peptidase 9, X-linked 1.01321
CCDC51 coiled-coil domain containing 51 1.0129
EIF3K eukaryotic translation initiation factor 3, subunit K 1.01259
MRPS33 mitochondrial ribosomal protein S33 1.00999
TMEM165 transmembrane protein 165 1.00954
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 1.00894
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 1.00728
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 1.00222
TRIM24 tripartite motif containing 24 1.00168

low expression

Symbol Name Standardized Value
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) -2.80461
OR1I1 olfactory receptor, family 1, subfamily I, member 1 -2.46611
MMP21 matrix metallopeptidase 21 -2.39825
OIP5 Opa interacting protein 5 -2.24914
GSC2 goosecoid homeobox 2 -2.19785
AIF1 allograft inflammatory factor 1 -2.16412
NRROS negative regulator of reactive oxygen species -2.15554
EGLN3 egl-9 family hypoxia-inducible factor 3 -2.11544
CCDC79 coiled-coil domain containing 79 -2.03558
TICAM1 toll-like receptor adaptor molecule 1 -2.01396
RSG1 REM2 and RAB-like small GTPase 1 -2.00743
OSMR oncostatin M receptor -1.86263
HSCB HscB mitochondrial iron-sulfur cluster co-chaperone -1.75011
POU4F3 POU class 4 homeobox 3 -1.72472
JAM2 junctional adhesion molecule 2 -1.70274
FAM217B family with sequence similarity 217, member B -1.70124
POF1B premature ovarian failure, 1B -1.69839
EPHX3 epoxide hydrolase 3 -1.68958
OR7C1 olfactory receptor, family 7, subfamily C, member 1 -1.61103
SUSD5 sushi domain containing 5 -1.56635
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4 -1.56046
TRAT1 T cell receptor associated transmembrane adaptor 1 -1.55358
RBM44 RNA binding motif protein 44 -1.54716
ADAM20 ADAM metallopeptidase domain 20 -1.51705
CASC5 cancer susceptibility candidate 5 -1.51683
KRT15 keratin 15, type I -1.51328
A1CF APOBEC1 complementation factor -1.51166
HIC1 hypermethylated in cancer 1 -1.45884
OTUD6A OTU deubiquitinase 6A -1.44611
AKR1C4 aldo-keto reductase family 1, member C4 -1.42611
LEP leptin -1.41264
UBE2W ubiquitin-conjugating enzyme E2W (putative) -1.41202
ALPI alkaline phosphatase, intestinal -1.41087
KRT1 keratin 1, type II -1.39706
KRTCAP3 keratinocyte associated protein 3 -1.39496
PQLC2 PQ loop repeat containing 2 -1.38659
PTPN7 protein tyrosine phosphatase, non-receptor type 7 -1.38472
UNC93A unc-93 homolog A (C. elegans) -1.38468
TXNDC2 thioredoxin domain containing 2 (spermatozoa) -1.37619
ZNF267 zinc finger protein 267 -1.36507
ZC3H6 zinc finger CCCH-type containing 6 -1.36103
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D -1.35809
C3AR1 complement component 3a receptor 1 -1.34735
PIGW phosphatidylinositol glycan anchor biosynthesis, class W -1.34244
EGFL6 EGF-like-domain, multiple 6 -1.34078
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1 -1.33651
MARC2 mitochondrial amidoxime reducing component 2 -1.33081
CCR8 chemokine (C-C motif) receptor 8 -1.3257
PCDHGA7 protocadherin gamma subfamily A, 7 -1.32518
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -1.32435
SLC26A3 solute carrier family 26 (anion exchanger), member 3 -1.31535
MEI1 meiosis inhibitor 1 -1.31491
HIST1H2AK histone cluster 1, H2ak -1.30907
MAP7D3 MAP7 domain containing 3 -1.30201
CDC25C cell division cycle 25C -1.30129
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -1.29482
ST14 suppression of tumorigenicity 14 (colon carcinoma) -1.29359
VAX1 ventral anterior homeobox 1 -1.28742
RTN4RL1 reticulon 4 receptor-like 1 -1.28161
PCDHGB6 protocadherin gamma subfamily B, 6 -1.28143
FREM1 FRAS1 related extracellular matrix 1 -1.28098
DYTN dystrotelin -1.26555
OR10A2 olfactory receptor, family 10, subfamily A, member 2 -1.26452
CRY1 cryptochrome circadian clock 1 -1.25441
TMEM114 transmembrane protein 114 -1.25409
PTBP3 polypyrimidine tract binding protein 3 -1.2528
VPS51 vacuolar protein sorting 51 homolog (S. cerevisiae) -1.24746
PCDHA7 protocadherin alpha 7 -1.23964
DPPA2 developmental pluripotency associated 2 -1.23373
SPNS3 spinster homolog 3 (Drosophila) -1.2318
ARL13A ADP-ribosylation factor-like 13A -1.22893
BOLL boule-like RNA-binding protein -1.22695
TBC1D21 TBC1 domain family, member 21 -1.22504
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1 -1.22206
IZUMO1R IZUMO1 receptor, JUNO -1.21378
MFSD2B major facilitator superfamily domain containing 2B -1.2108
ITGA1 integrin, alpha 1 -1.20999
PRELID2 PRELI domain containing 2 -1.20991
ASB2 ankyrin repeat and SOCS box containing 2 -1.20952
FOXG1 forkhead box G1 -1.20806
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7 -1.20745
GDF2 growth differentiation factor 2 -1.20341
NXPH2 neurexophilin 2 -1.20222
SAA2-SAA4 SAA2-SAA4 readthrough -1.20108
TDO2 tryptophan 2,3-dioxygenase -1.20022
ARID5A AT rich interactive domain 5A (MRF1-like) -1.19709
OR51D1 olfactory receptor, family 51, subfamily D, member 1 -1.1944
RPL27 ribosomal protein L27 -1.19235
ADAM29 ADAM metallopeptidase domain 29 -1.19091
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa -1.18556
ZP2 zona pellucida glycoprotein 2 (sperm receptor) -1.18048
PBX1 pre-B-cell leukemia homeobox 1 -1.17789
UNC5C unc-5 homolog C (C. elegans) -1.17764
COMMD1 copper metabolism (Murr1) domain containing 1 -1.17693
HIPK4 homeodomain interacting protein kinase 4 -1.17594
FOXL1 forkhead box L1 -1.17577
ANG angiogenin, ribonuclease, RNase A family, 5 -1.17569
DHTKD1 dehydrogenase E1 and transketolase domain containing 1 -1.17369
TAS2R13 taste receptor, type 2, member 13 -1.16977
MTX1 metaxin 1 -1.16929
SECTM1 secreted and transmembrane 1 -1.16562
CPA3 carboxypeptidase A3 (mast cell) -1.16387
OR4K2 olfactory receptor, family 4, subfamily K, member 2 -1.15911
ZNF473 zinc finger protein 473 -1.15684
SEC63 SEC63 homolog (S. cerevisiae) -1.1512
POLQ polymerase (DNA directed), theta -1.14879
CLDN19 claudin 19 -1.14836
LIF leukemia inhibitory factor -1.14626
SLC17A4 solute carrier family 17, member 4 -1.14455
AQP2 aquaporin 2 (collecting duct) -1.14386
BSX brain-specific homeobox -1.14181
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3 -1.13786
PATE2 prostate and testis expressed 2 -1.13627
LHX2 LIM homeobox 2 -1.13036
FAM110D family with sequence similarity 110, member D -1.13028
CATSPERD catsper channel auxiliary subunit delta -1.12957
CCL25 chemokine (C-C motif) ligand 25 -1.12304
CCDC23 coiled-coil domain containing 23 -1.12169
HES1 hes family bHLH transcription factor 1 -1.1206
ZNF616 zinc finger protein 616 -1.11984
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -1.11921
PLXNC1 plexin C1 -1.11846
CYSLTR2 cysteinyl leukotriene receptor 2 -1.11672
CTNND1 catenin (cadherin-associated protein), delta 1 -1.11633
EPOR erythropoietin receptor -1.10195
KLHL3 kelch-like family member 3 -1.09904
SHISA2 shisa family member 2 -1.09653
CECR2 cat eye syndrome chromosome region, candidate 2 -1.0951
STARD8 StAR-related lipid transfer (START) domain containing 8 -1.09485
FAT4 FAT atypical cadherin 4 -1.08921
RORB RAR-related orphan receptor B -1.0887
FAM45A family with sequence similarity 45, member A -1.08586
TBX10 T-box 10 -1.08327
SUSD6 sushi domain containing 6 -1.08198
FCGBP Fc fragment of IgG binding protein -1.08001
FRMD6 FERM domain containing 6 -1.0793
ALG3 ALG3, alpha-1,3- mannosyltransferase -1.06881
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 -1.06521
TCEAL7 transcription elongation factor A (SII)-like 7 -1.06487
PDCD1LG2 programmed cell death 1 ligand 2 -1.06352
CNFN cornifelin -1.06321
RETN resistin -1.06211
IRF5 interferon regulatory factor 5 -1.06209
GPR20 G protein-coupled receptor 20 -1.06025
TM9SF1 transmembrane 9 superfamily member 1 -1.05908
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 -1.05664
BAHCC1 BAH domain and coiled-coil containing 1 -1.05524
TOM1L1 target of myb1 (chicken)-like 1 -1.05241
NLRP12 NLR family, pyrin domain containing 12 -1.05014
PRR15L proline rich 15-like -1.04994
MFGE8 milk fat globule-EGF factor 8 protein -1.04743
OR6A2 olfactory receptor, family 6, subfamily A, member 2 -1.04395
GNG10 guanine nucleotide binding protein (G protein), gamma 10 -1.0426
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) -1.04129
ACOT1 acyl-CoA thioesterase 1 -1.0391
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 -1.03754
PCDHGA1 protocadherin gamma subfamily A, 1 -1.03587
SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporter), member 1 -1.03565
HES5 hes family bHLH transcription factor 5 -1.03309
EN2 engrailed homeobox 2 -1.03182
TNS3 tensin 3 -1.02857
UNK unkempt family zinc finger -1.02678
WIPF1 WAS/WASL interacting protein family, member 1 -1.02599
HK3 hexokinase 3 (white cell) -1.02329
CEP112 centrosomal protein 112kDa -1.02133
RYR1 ryanodine receptor 1 (skeletal) -1.02049
FMO5 flavin containing monooxygenase 5 -1.01827
MAN1C1 mannosidase, alpha, class 1C, member 1 -1.01782
ADAMTSL1 ADAMTS-like 1 -1.017
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 -1.01664
POU4F2 POU class 4 homeobox 2 -1.01601
DUSP6 dual specificity phosphatase 6 -1.01509
ITLN1 intelectin 1 (galactofuranose binding) -1.01359
TTPA tocopherol (alpha) transfer protein -1.0135
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon) -1.01341
C21ORF62 chromosome 21 open reading frame 62 -1.0125
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) -1.00703
RAB8B RAB8B, member RAS oncogene family -1.00668
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) -1.00558
LRR1 leucine rich repeat protein 1 -1.00438
GPR33 G protein-coupled receptor 33 (gene/pseudogene) -1.00431
TYRP1 tyrosinase-related protein 1 -1.00271