psammoma body Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A psammoma body is a round collection of calcium, seen microscopically. The term is derived from the Greek word psammos meaning sand. Psammoma bodies are commonly seen in certain tumors. (BRENDA Tissue and Enzyme Source Ontology, BTO_0005008)
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Genes

61 proteins co-occuring with the tissue psammoma body in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
TFE3 transcription factor binding to IGHM enhancer 3 1.85534
KRT7 keratin 7, type II 1.63406
TG thyroglobulin 1.38047
SST somatostatin 1.37499
ASMTL acetylserotonin O-methyltransferase-like 1.19045
TSPO translocator protein (18kDa) 1.12217
ENO2 enolase 2 (gamma, neuronal) 1.07044
KRT20 keratin 20, type I 1.05104
WT1 Wilms tumor 1 1.0282
CALCA calcitonin-related polypeptide alpha 0.903275
PTGER4 prostaglandin E receptor 4 (subtype EP4) 0.874016
SPP1 secreted phosphoprotein 1 0.859258
PGR progesterone receptor 0.850845
AMACR alpha-methylacyl-CoA racemase 0.837833
GAST gastrin 0.835737
OPTC opticin 0.821085
FBXO5 F-box protein 5 0.806465
TP53 tumor protein p53 0.775249
CDH16 cadherin 16, KSP-cadherin 0.757432
PAX8 paired box 8 0.744627
AURKAIP1 aurora kinase A interacting protein 1 0.734735
CD68 CD68 molecule 0.641238
SYP synaptophysin 0.635167
CALB2 calbindin 2 0.630718
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.60893
B3GAT1 beta-1,3-glucuronyltransferase 1 0.604904
ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1 0.586828
PRCC papillary renal cell carcinoma (translocation-associated) 0.585224
CTSK cathepsin K 0.579617
PPY pancreatic polypeptide 0.566428
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.560847
NKX2-1 NK2 homeobox 1 0.555274
ALK anaplastic lymphoma receptor tyrosine kinase 0.535042
CHGA chromogranin A 0.53267
KRT5 keratin 5, type II 0.528323
ESR1 estrogen receptor 1 0.506672
ERBB2 erb-b2 receptor tyrosine kinase 2 0.479312
CD34 CD34 molecule 0.473869
OSCAR osteoclast associated, immunoglobulin-like receptor 0.47348
CA9 carbonic anhydrase IX 0.466111
GCG glucagon 0.405935
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.404418
BCL3 B-cell CLL/lymphoma 3 0.387404
CLDN1 claudin 1 0.38552
CLDN7 claudin 7 0.378748
MLANA melan-A 0.374993
BMP1 bone morphogenetic protein 1 0.370496
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.36526
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 0.363766
BGLAP bone gamma-carboxyglutamate (gla) protein 0.342233
TPO thyroid peroxidase 0.341126
CPN1 carboxypeptidase N, polypeptide 1 0.334865
NF1 neurofibromin 1 0.332661
MN1 meningioma (disrupted in balanced translocation) 1 0.301758
CD5 CD5 molecule 0.283191
ANO1 anoctamin 1, calcium activated chloride channel 0.28213
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.280364
SH2D1A SH2 domain containing 1A 0.248683
PIP prolactin-induced protein 0.218613
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.216528
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.215928