precatalytic spliceosome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs. (Gene Ontology, GO_0071011)
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12 proteins co-occuring with the precatalytic spliceosome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
BUD31 BUD31 homolog (S. cerevisiae) 1.70322
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 1.67568
PRPF4B pre-mRNA processing factor 4B 1.25917
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 1.23975
PRPF6 pre-mRNA processing factor 6 1.234
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.867666
SKAP2 src kinase associated phosphoprotein 2 0.742318
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.734666
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.731973
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.477233
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.415728
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.39626