pre-autophagosomal structure membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A cellular membrane associated with the pre-autophagosomal structure. (Gene Ontology, GO_0034045)
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Genes

77 proteins co-occuring with the pre-autophagosomal structure membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ATG16L1 autophagy related 16-like 1 (S. cerevisiae) 1.96145
WIPI1 WD repeat domain, phosphoinositide interacting 1 1.82321
ULK1 unc-51 like autophagy activating kinase 1 1.77927
RB1CC1 RB1-inducible coiled-coil 1 1.72432
ATG5 autophagy related 5 1.61764
ATG12 autophagy related 12 1.58795
WIPI2 WD repeat domain, phosphoinositide interacting 2 1.55367
ATG14 autophagy related 14 1.51299
ACBD5 acyl-CoA binding domain containing 5 1.38516
STX17 syntaxin 17 1.37741
UVRAG UV radiation resistance associated 1.2825
ATG3 autophagy related 3 1.26709
TECPR1 tectonin beta-propeller repeat containing 1 1.25917
ATG101 autophagy related 101 1.23505
RAB33B RAB33B, member RAS oncogene family 1.22724
NRBF2 nuclear receptor binding factor 2 1.2086
ZFYVE1 zinc finger, FYVE domain containing 1 1.16799
ATG4B autophagy related 4B, cysteine peptidase 1.12296
GABARAP GABA(A) receptor-associated protein 1.1148
PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4 1.10664
BECN1 beclin 1, autophagy related 1.09594
RAB33A RAB33A, member RAS oncogene family 1.06751
NBR1 neighbor of BRCA1 gene 1 1.0569
ATG9A autophagy related 9A 1.02979
ATG16L2 autophagy related 16-like 2 (S. cerevisiae) 1.0258
ULK2 unc-51 like autophagy activating kinase 2 1.00251
ATG2A autophagy related 2A 0.951142
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.948284
SQSTM1 sequestosome 1 0.929833
TBC1D17 TBC1 domain family, member 17 0.917177
KIAA0226 KIAA0226 0.90832
ATG2B autophagy related 2B 0.89672
ATG7 autophagy related 7 0.85388
MTMR14 myotubularin related protein 14 0.806606
TBC1D15 TBC1 domain family, member 15 0.776841
STX12 syntaxin 12 0.748641
MAP1LC3C microtubule-associated protein 1 light chain 3 gamma 0.71857
ATG4A autophagy related 4A, cysteine peptidase 0.710136
RALB v-ral simian leukemia viral oncogene homolog B 0.707039
VAMP8 vesicle-associated membrane protein 8 0.692955
SNX18 sorting nexin 18 0.692516
CPNE1 copine I 0.673328
CALCOCO2 calcium binding and coiled-coil domain 2 0.544823
AMBRA1 autophagy/beclin-1 regulator 1 0.538649
RAB24 RAB24, member RAS oncogene family 0.533309
SH3GLB1 SH3-domain GRB2-like endophilin B1 0.528388
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.51694
GABARAPL2 GABA(A) receptor-associated protein-like 2 0.50757
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 0.503912
ATG13 autophagy related 13 0.461998
VMP1 vacuole membrane protein 1 0.4608
IGKV3-20 immunoglobulin kappa variable 3-20 0.45641
LGALS8 lectin, galactoside-binding, soluble, 8 0.452825
PEG3 paternally expressed 3 0.437356
GABARAPL1 GABA(A) receptor-associated protein like 1 0.395098
TNK2 tyrosine kinase, non-receptor, 2 0.390455
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.364331
MAP4 microtubule-associated protein 4 0.362804
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.358228
EDEM1 ER degradation enhancer, mannosidase alpha-like 1 0.341907
CHMP2B charged multivesicular body protein 2B 0.33511
BRWD1 bromodomain and WD repeat domain containing 1 0.303655
PI3 peptidase inhibitor 3, skin-derived 0.294748
GCG glucagon 0.285138
OPTN optineurin 0.278877
MAP2 microtubule-associated protein 2 0.263485
IGF2R insulin-like growth factor 2 receptor 0.260566
ACPP acid phosphatase, prostate 0.256197
MAPT microtubule-associated protein tau 0.252202
TFEB transcription factor EB 0.220321
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 0.208137
PRDX2 peroxiredoxin 2 0.201335
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.176305
APEH acylaminoacyl-peptide hydrolase 0.173003
PEX14 peroxisomal biogenesis factor 14 0.168349
CYTH1 cytohesin 1 0.162763
SCOC short coiled-coil protein 0.158882