pml body Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection. (Gene Ontology, GO_0016605)
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Genes

83 proteins localized to the pml body cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 0.663342
ELF4 E74-like factor 4 (ets domain transcription factor) 0.663342
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 0.663342
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 0.663342
TRIM16 tripartite motif containing 16 0.663342
MAGEA2 melanoma antigen family A2 0.663342
ISG20 interferon stimulated exonuclease gene 20kDa 0.663342
TERT telomerase reverse transcriptase 0.663342
SQSTM1 sequestosome 1 0.663342
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4 0.663342
PML promyelocytic leukemia 0.663342
CIITA class II, major histocompatibility complex, transactivator 0.663342
RNF4 ring finger protein 4 0.663342
UBE2I ubiquitin-conjugating enzyme E2I 0.663342
DAXX death-domain associated protein 0.663342
SP3 Sp3 transcription factor 0.663342
RAD51 RAD51 recombinase 0.663342
ATR ATR serine/threonine kinase 0.663342
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.663342
UBN1 ubinuclein 1 0.663342
SATB1 SATB homeobox 1 0.663342
ZMYM2 zinc finger, MYM-type 2 0.663342
BLM Bloom syndrome, RecQ helicase-like 0.663342
KAT6A K(lysine) acetyltransferase 6A 0.663342
MAPK7 mitogen-activated protein kinase 7 0.663342
SMC6 structural maintenance of chromosomes 6 0.663342
SMC5 structural maintenance of chromosomes 5 0.663342
CHEK2 checkpoint kinase 2 0.663342
RFWD3 ring finger and WD repeat domain 3 0.663342
TOP3A topoisomerase (DNA) III alpha 0.663342
CDK9 cyclin-dependent kinase 9 0.663342
SUMO2 small ubiquitin-like modifier 2 0.663342
SUMO1 small ubiquitin-like modifier 1 0.663342
ZBTB16 zinc finger and BTB domain containing 16 0.663342
PTEN phosphatase and tensin homolog 0.663342
TP53INP2 tumor protein p53 inducible nuclear protein 2 0.663342
ASXL2 additional sex combs like transcriptional regulator 2 0.663342
SKI SKI proto-oncogene 0.663342
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.663342
CASP8AP2 caspase 8 associated protein 2 0.663342
RB1 retinoblastoma 1 0.663342
DAPK3 death-associated protein kinase 3 0.663342
CHFR checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase 0.663342
MAGEA2B melanoma antigen family A2B 0.663342
SKIL SKI-like proto-oncogene 0.663342
NBN nibrin 0.663342
TOPBP1 topoisomerase (DNA) II binding protein 1 0.663342
HIRA histone cell cycle regulator 0.663342
RDM1 RAD52 motif containing 1 0.663342
TRIM8 tripartite motif containing 8 0.663342
RPAIN RPA interacting protein 0.663342
TDP2 tyrosyl-DNA phosphodiesterase 2 0.663342
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.663342
PATL1 protein associated with topoisomerase II homolog 1 (yeast) 0.663342
SPTBN4 spectrin, beta, non-erythrocytic 4 0.663342
RPA1 replication protein A1, 70kDa 0.663342
RPA2 replication protein A2, 32kDa 0.663342
MORC3 MORC family CW-type zinc finger 3 0.663342
KLHL20 kelch-like family member 20 0.663342
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 0.663342
NFE2 nuclear factor, erythroid 2 0.663342
TP53 tumor protein p53 0.663342
PIAS2 protein inhibitor of activated STAT, 2 0.663342
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 0.663342
SP100 SP100 nuclear antigen 0.663342
WDFY3 WD repeat and FYVE domain containing 3 0.663342
HIPK2 homeodomain interacting protein kinase 2 0.663342
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.663342
EIF3E eukaryotic translation initiation factor 3, subunit E 0.663342
TENM2 teneurin transmembrane protein 2 0.237908
MLIP muscular LMNA-interacting protein 0.237908
N4BP1 NEDD4 binding protein 1 0.237908
PARK7 parkinson protein 7 0.237908
SIRT1 sirtuin 1 0.237908
HIPK1 homeodomain interacting protein kinase 1 0.03318
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.03318
MAX MYC associated factor X 0.03318
TDG thymine-DNA glycosylase 0.03318
PIAS1 protein inhibitor of activated STAT, 1 0.03318
RNF6 ring finger protein (C3H2C3 type) 6 0.03318
NR2C1 nuclear receptor subfamily 2, group C, member 1 0.03318
HIPK3 homeodomain interacting protein kinase 3 0.03318
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2 0.03318