plasma membrane-derived chromatophore Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A pigment-bearing structure that is derived from the cytoplasmic membrane, sometimes consisting of simple invaginations and sometimes a complete vesicle. This component is found in certain photosynthetic bacteria and cyanobacteria. (Gene Ontology, GO_0042716)
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Genes

101 proteins co-occuring with the plasma membrane-derived chromatophore cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 2.27675
ARPP21 cAMP-regulated phosphoprotein, 21kDa 1.39851
DHRSX dehydrogenase/reductase (SDR family) X-linked 1.38905
NME1-NME2 NME1-NME2 readthrough 1.18235
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 1.09238
SPX spexin hormone 1.07765
RASEF RAS and EF-hand domain containing 1.05842
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) 1.04381
NME2 NME/NM23 nucleoside diphosphate kinase 2 1.02181
FOXD3 forkhead box D3 0.964549
BFSP2 beaded filament structural protein 2, phakinin 0.959748
MC5R melanocortin 5 receptor 0.931716
CLEC3A C-type lectin domain family 3, member A 0.927013
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11 0.916709
CLEC2B C-type lectin domain family 2, member B 0.909716
CLEC10A C-type lectin domain family 10, member A 0.90321
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 0.901818
XDH xanthine dehydrogenase 0.895794
AIP aryl hydrocarbon receptor interacting protein 0.851583
GCH1 GTP cyclohydrolase 1 0.813028
FBXW4 F-box and WD repeat domain containing 4 0.803396
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.795604
BNC2 basonuclin 2 0.795145
TYR tyrosinase 0.788733
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 0.788275
POMC proopiomelanocortin 0.781869
MCHR2 melanin-concentrating hormone receptor 2 0.766349
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 0.736014
MC2R melanocortin 2 receptor (adrenocorticotropic hormone) 0.699983
PPA1 pyrophosphatase (inorganic) 1 0.675934
PAX3 paired box 3 0.675065
MGAM maltase-glucoamylase 0.67246
ASIP agouti signaling protein 0.647862
NPDC1 neural proliferation, differentiation and control, 1 0.647433
PGAP3 post-GPI attachment to proteins 3 0.617982
CPA2 carboxypeptidase A2 (pancreatic) 0.601909
ALLC allantoicase 0.590973
ECE2 endothelin converting enzyme 2 0.590553
MITF microphthalmia-associated transcription factor 0.585942
TP63 tumor protein p63 0.5597
CSF1R colony stimulating factor 1 receptor 0.559285
SLC24A5 solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 0.552251
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 0.494585
CSF1 colony stimulating factor 1 (macrophage) 0.493371
TRIM10 tripartite motif containing 10 0.492157
CPA1 carboxypeptidase A1 (pancreatic) 0.491752
NR3C2 nuclear receptor subfamily 3, group C, member 2 0.487307
TRIM26 tripartite motif containing 26 0.4865
RBBP9 retinoblastoma binding protein 9 0.477233
TRIM15 tripartite motif containing 15 0.476027
HACD3 3-hydroxyacyl-CoA dehydratase 3 0.475223
PAX7 paired box 7 0.451631
NNT nicotinamide nucleotide transhydrogenase 0.437356
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 0.43696
SHD Src homology 2 domain containing transforming protein D 0.420036
SOX5 SRY (sex determining region Y)-box 5 0.395098
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.382354
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.381199
CLMP CXADR-like membrane protein 0.376202
DCD dermcidin 0.337751
PROK2 prokineticin 2 0.296601
TXN thioredoxin 0.277406
RPL3 ribosomal protein L3 0.275936
CLPS colipase, pancreatic 0.275569
EFS embryonal Fyn-associated substrate 0.264946
LDHAL6A lactate dehydrogenase A-like 6A 0.253653
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.253291
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.252202
CDSN corneodesmosin 0.242076
RNH1 ribonuclease/angiogenin inhibitor 1 0.237042
SOCS2 suppressor of cytokine signaling 2 0.236324
FGFR4 fibroblast growth factor receptor 4 0.220673
DNAH8 dynein, axonemal, heavy chain 8 0.212627
SOX10 SRY (sex determining region Y)-box 10 0.208481
GZMM granzyme M (lymphocyte met-ase 1) 0.204378
FES FES proto-oncogene, tyrosine kinase 0.202346
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.200999
GYPA glycophorin A (MNS blood group) 0.194371
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 0.188274
AOX1 aldehyde oxidase 1 0.187646
MPV17 MpV17 mitochondrial inner membrane protein 0.184853
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.182122
CARS cysteinyl-tRNA synthetase 0.167125
FN1 fibronectin 1 0.163641
FBXO17 F-box protein 17 0.161693
MC4R melanocortin 4 receptor 0.158692
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 0.14117
FGFR3 fibroblast growth factor receptor 3 0.140511
PRLR prolactin receptor 0.14045
PTS 6-pyruvoyltetrahydropterin synthase 0.140388
EDNRB endothelin receptor type B 0.140208
DCT dopachrome tautomerase 0.139964
FOXP2 forkhead box P2 0.139445
ACTB actin, beta 0.139157
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.13873
ACTG1 actin gamma 1 0.138385
FGF7 fibroblast growth factor 7 0.138087
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 0.137645
GHR growth hormone receptor 0.13715
KITLG KIT ligand 0.137065
FGFR2 fibroblast growth factor receptor 2 0.136611