plant tumor tissue Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

111 proteins co-occuring with the tissue plant tumor tissue in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 2.5045
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 2.01078
HMGA1 high mobility group AT-hook 1 1.81583
GUSB glucuronidase, beta 1.78639
ATN1 atrophin 1 1.56476
ATG4C autophagy related 4C, cysteine peptidase 1.42737
ZNF346 zinc finger protein 346 1.34496
QPRT quinolinate phosphoribosyltransferase 1.34224
MYB v-myb avian myeloblastosis viral oncogene homolog 1.28636
FOXL2 forkhead box L2 1.27874
TPX2 TPX2, microtubule-associated 1.24208
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 1.22202
NFYC nuclear transcription factor Y, gamma 1.17136
VIPR1 vasoactive intestinal peptide receptor 1 1.16781
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 1.16027
PNPT1 polyribonucleotide nucleotidyltransferase 1 1.11774
GGPS1 geranylgeranyl diphosphate synthase 1 1.10801
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4 1.07706
FDFT1 farnesyl-diphosphate farnesyltransferase 1 0.996295
CENPH centromere protein H 0.922055
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.893921
ABI3 ABI family, member 3 0.892648
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 0.887981
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.883321
IPP intracisternal A particle-promoted polypeptide 0.868529
RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 0.863891
RRM2 ribonucleotide reductase M2 0.846225
CLNK cytokine-dependent hematopoietic cell linker 0.791044
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated) 0.774004
GLUL glutamate-ammonia ligase 0.762397
WDHD1 WD repeat and HMG-box DNA binding protein 1 0.705583
PRODH proline dehydrogenase (oxidase) 1 0.691268
NARS asparaginyl-tRNA synthetase 0.688409
DICER1 dicer 1, ribonuclease type III 0.688409
FDPS farnesyl diphosphate synthase 0.680656
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.661116
PSPH phosphoserine phosphatase 0.65746
DNASE1 deoxyribonuclease I 0.650966
XPR1 xenotropic and polytropic retrovirus receptor 1 0.648532
APEH acylaminoacyl-peptide hydrolase 0.636785
IFNA2 interferon, alpha 2 0.609332
RHO rhodopsin 0.608124
SOD2 superoxide dismutase 2, mitochondrial 0.600881
CASD1 CAS1 domain containing 1 0.58242
ATAD2 ATPase family, AAA domain containing 2 0.560449
SH2D3A SH2 domain containing 3A 0.548517
CAT catalase 0.534647
SQLE squalene epoxidase 0.531089
GMPS guanine monphosphate synthase 0.523194
NIN ninein (GSK3B interacting protein) 0.497266
AMER1 APC membrane recruitment protein 1 0.495701
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 0.492963
LTB lymphotoxin beta (TNF superfamily, member 3) 0.463787
RAB1A RAB1A, member RAS oncogene family 0.462626
CCL15 chemokine (C-C motif) ligand 15 0.456442
REG3A regenerating islet-derived 3 alpha 0.450271
UGDH UDP-glucose 6-dehydrogenase 0.449116
ASPH aspartate beta-hydroxylase 0.437205
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 0.436055
GPR176 G protein-coupled receptor 176 0.430695
WIPF2 WAS/WASL interacting protein family, member 2 0.424963
AGA aspartylglucosaminidase 0.421148
KLK8 kallikrein-related peptidase 8 0.416576
HPD 4-hydroxyphenylpyruvate dioxygenase 0.416195
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.415434
ODC1 ornithine decarboxylase 1 0.408212
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 0.405176
UGP2 UDP-glucose pyrophosphorylase 2 0.388158
RBMS1 RNA binding motif, single stranded interacting protein 1 0.382131
PSCA prostate stem cell antigen 0.379875
RAD50 RAD50 homolog (S. cerevisiae) 0.374618
B4GALNT2 beta-1,4-N-acetyl-galactosaminyl transferase 2 0.351485
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.345928
AHCY adenosylhomocysteinase 0.345188
DGAT1 diacylglycerol O-acyltransferase 1 0.342602
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae) 0.334865
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.33156
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 0.314772
CSNK2B casein kinase 2, beta polypeptide 0.306083
LOX lysyl oxidase 0.29673
ERN1 endoplasmic reticulum to nucleus signaling 1 0.293866
CST4 cystatin S 0.288514
TOP1 topoisomerase (DNA) I 0.273696
EN1 engrailed homeobox 1 0.272649
TPI1 triosephosphate isomerase 1 0.262986
RPE65 retinal pigment epithelium-specific protein 65kDa 0.261284
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.25259
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 0.250627
GFER growth factor, augmenter of liver regeneration 0.249653
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.241746
BAG1 BCL2-associated athanogene 0.234302
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.232039
ALLC allantoicase 0.22797
PNMA2 paraneoplastic Ma antigen 2 0.227707
B3GAT2 beta-1,3-glucuronyltransferase 2 0.223419
LUM lumican 0.219264
SEBOX SEBOX homeobox 0.215147
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.213291
H3F3A H3 histone, family 3A 0.191898
H3F3B H3 histone, family 3B (H3.3B) 0.191898
TTR transthyretin 0.191332
LARS leucyl-tRNA synthetase 0.190908
IRF6 interferon regulatory factor 6 0.189552
NTF4 neurotrophin 4 0.188766
FSCN1 fascin actin-bundling protein 1 0.188414
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.187774
FUT2 fucosyltransferase 2 (secretor status included) 0.18385
HPX hemopexin 0.182644
CD1C CD1c molecule 0.182232
CSN1S1 casein alpha s1 0.181833
COG2 component of oligomeric golgi complex 2 0.180226