plant bud Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A small lateral or terminal protuberance on the stem of a plant that may develop into a flower, leaf, or shoot. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000158)
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Genes

245 proteins co-occuring with the tissue plant bud in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
BOLL boule-like RNA-binding protein 1.79094
RPL27 ribosomal protein L27 1.55455
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 1.38642
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) 1.38459
WFDC13 WAP four-disulfide core domain 13 1.33139
PSD4 pleckstrin and Sec7 domain containing 4 1.30028
GUSB glucuronidase, beta 1.25681
ABT1 activator of basal transcription 1 1.18157
AXIN2 axin 2 1.14919
IDI2 isopentenyl-diphosphate delta isomerase 2 1.13811
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 1.10668
SF3B2 splicing factor 3b, subunit 2, 145kDa 1.10181
KIN Kin17 DNA and RNA binding protein 1.08413
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 1.07265
PIKFYVE phosphoinositide kinase, FYVE finger containing 1.06735
CLPTM1 cleft lip and palate associated transmembrane protein 1 1.01943
RAD52 RAD52 homolog (S. cerevisiae) 0.996731
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.990639
PSD3 pleckstrin and Sec7 domain containing 3 0.988032
SFTPC surfactant protein C 0.950393
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 0.928906
PPME1 protein phosphatase methylesterase 1 0.92805
SIGLEC10 sialic acid binding Ig-like lectin 10 0.910946
NPDC1 neural proliferation, differentiation and control, 1 0.889253
RHOV ras homolog family member V 0.879935
YME1L1 YME1-like 1 ATPase 0.871905
BCAS2 breast carcinoma amplified sequence 2 0.866842
OMA1 OMA1 zinc metallopeptidase 0.865999
ZKSCAN7 zinc finger with KRAB and SCAN domains 7 0.858416
ARHGAP21 Rho GTPase activating protein 21 0.838672
RPS15A ribosomal protein S15a 0.838252
HIST1H3F histone cluster 1, H3f 0.816486
HIST1H3J histone cluster 1, H3j 0.816486
HIST1H3G histone cluster 1, H3g 0.816486
HIST1H3D histone cluster 1, H3d 0.816486
HIST1H3I histone cluster 1, H3i 0.816486
PAX7 paired box 7 0.81565
HIST1H3B histone cluster 1, H3b 0.81565
RPL10 ribosomal protein L10 0.811891
SAFB scaffold attachment factor B 0.804378
HIST1H3E histone cluster 1, H3e 0.774004
RPL34 ribosomal protein L34 0.77193
FGF10 fibroblast growth factor 10 0.766954
ELF2 E74-like factor 2 (ets domain transcription factor) 0.76157
HIST1H3C histone cluster 1, H3c 0.758673
HIST1H3H histone cluster 1, H3h 0.758259
HIST1H3A histone cluster 1, H3a 0.751231
SLC10A3 solute carrier family 10, member 3 0.747927
MYB v-myb avian myeloblastosis viral oncogene homolog 0.747927
MED25 mediator complex subunit 25 0.745451
TPD52L1 tumor protein D52-like 1 0.733089
FAM83H family with sequence similarity 83, member H 0.730208
KREMEN1 kringle containing transmembrane protein 1 0.727741
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 0.70108
IDI1 isopentenyl-diphosphate delta isomerase 1 0.700671
RPS16 ribosomal protein S16 0.699035
NCK2 NCK adaptor protein 2 0.696989
LOX lysyl oxidase 0.678617
CDC34 cell division cycle 34 0.637594
AMBN ameloblastin (enamel matrix protein) 0.633953
PLAGL2 pleiomorphic adenoma gene-like 2 0.602892
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin) 0.598067
MT-ATP8 ATP synthase F0 subunit 8 0.592444
HIST1H4E histone cluster 1, H4e 0.590036
HIST1H4C histone cluster 1, H4c 0.590036
HIST1H4B histone cluster 1, H4b 0.590036
HIST1H4D histone cluster 1, H4d 0.590036
HIST1H4K histone cluster 1, H4k 0.590036
HIST1H4I histone cluster 1, H4i 0.590036
HIST1H4F histone cluster 1, H4f 0.590036
HIST1H4H histone cluster 1, H4h 0.590036
HIST2H4B histone cluster 2, H4b 0.590036
HIST1H4A histone cluster 1, H4a 0.590036
HIST1H4J histone cluster 1, H4j 0.590036
HIST2H4A histone cluster 2, H4a 0.589635
HIST1H4L histone cluster 1, H4l 0.588431
HIST4H4 histone cluster 4, H4 0.588031
DCXR dicarbonyl/L-xylulose reductase 0.581218
DSG1 desmoglein 1 0.569222
IREB2 iron-responsive element binding protein 2 0.565232
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.558856
CCDC130 coiled-coil domain containing 130 0.548517
GLE1 GLE1 RNA export mediator 0.524771
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.518859
LAX1 lymphocyte transmembrane adaptor 1 0.515317
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.505887
TECR trans-2,3-enoyl-CoA reductase 0.503141
NLN neurolysin (metallopeptidase M3 family) 0.494528
RBBP9 retinoblastoma binding protein 9 0.493745
PNLIP pancreatic lipase 0.481259
GLA galactosidase, alpha 0.479702
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.479702
NUP214 nucleoporin 214kDa 0.478145
PDPN podoplanin 0.462626
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.461078
HOXB5 homeobox B5 0.460692
NPW neuropeptide W 0.450271
ZC3H12D zinc finger CCCH-type containing 12D 0.449886
HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 0.448731
SYCP3 synaptonemal complex protein 3 0.442578
NOTCH2NL notch 2 N-terminal like 0.433757
AATF apoptosis antagonizing transcription factor 0.432608
SQLE squalene epoxidase 0.432225
NOTCH2 notch 2 0.430695
ZNF501 zinc finger protein 501 0.429165
ZNF763 zinc finger protein 763 0.429165
ZNF629 zinc finger protein 629 0.429165
ZNF569 zinc finger protein 569 0.425726
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.418099
SHH sonic hedgehog 0.416957
ZNF44 zinc finger protein 44 0.412391
DSPP dentin sialophosphoprotein 0.410491
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.408592
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 0.408592
BARD1 BRCA1 associated RING domain 1 0.404039
ZNF436 zinc finger protein 436 0.390421
BCL6B B-cell CLL/lymphoma 6, member B 0.388535
PRPF4B pre-mRNA processing factor 4B 0.382508
MAT2A methionine adenosyltransferase II, alpha 0.378372
CLIP1 CAP-GLY domain containing linker protein 1 0.377245
TLK1 tousled-like kinase 1 0.376494
ETFA electron-transfer-flavoprotein, alpha polypeptide 0.376494
ACO1 aconitase 1, soluble 0.371619
NPEPPS aminopeptidase puromycin sensitive 0.368624
TEK TEK tyrosine kinase, endothelial 0.361901
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.358919
STK4 serine/threonine kinase 4 0.354455
RAD51 RAD51 recombinase 0.351114
CDKN2A cyclin-dependent kinase inhibitor 2A 0.344449
TYR tyrosinase 0.341126
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.340388
JUN jun proto-oncogene 0.338177
PRKD3 protein kinase D3 0.336704
GLUL glutamate-ammonia ligase 0.3356
CCNA1 cyclin A1 0.333396
PLK4 polo-like kinase 4 0.333396
PCSK2 proprotein convertase subtilisin/kexin type 2 0.332661
HIST2H2AC histone cluster 2, H2ac 0.331194
HIST2H2AA4 histone cluster 2, H2aa4 0.33046
HIST2H2AA3 histone cluster 2, H2aa3 0.33046
SOD2 superoxide dismutase 2, mitochondrial 0.329361
ODC1 ornithine decarboxylase 1 0.324239
FGF1 fibroblast growth factor 1 (acidic) 0.321685
CNN1 calponin 1, basic, smooth muscle 0.31877
MGAM maltase-glucoamylase 0.316588
MAT1A methionine adenosyltransferase I, alpha 0.316224
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 0.310783
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.310421
FDFT1 farnesyl-diphosphate farnesyltransferase 1 0.306805
PPA1 pyrophosphatase (inorganic) 1 0.304279
CTSC cathepsin C 0.302838
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.30032
CALD1 caldesmon 1 0.289226
HIST1H2AJ histone cluster 1, H2aj 0.278603
HIST1H2AD histone cluster 1, H2ad 0.278603
HIST1H2AH histone cluster 1, H2ah 0.2779
H2AFJ H2A histone family, member J 0.277197
H2AFY2 H2A histone family, member Y2 0.275094
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.275094
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.274744
HIST1H2AM histone cluster 1, H2am 0.273696
H2AFB1 H2A histone family, member B1 0.273346
H2AFV H2A histone family, member V 0.272997
H2AFB2 H2A histone family, member B2 0.272997
HIST1H2AG histone cluster 1, H2ag 0.271952
HIST1H2AB histone cluster 1, H2ab 0.266757
HIST1H2AE histone cluster 1, H2ae 0.266757
NKX2-1 NK2 homeobox 1 0.263327
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.261284
DAND5 DAN domain family member 5, BMP antagonist 0.260267
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.259254
GADD45B growth arrest and DNA-damage-inducible, beta 0.257237
KLK15 kallikrein-related peptidase 15 0.253578
H2AFY H2A histone family, member Y 0.249653
PAOX polyamine oxidase (exo-N4-amino) 0.248361
ARF6 ADP-ribosylation factor 6 0.245807
NMT1 N-myristoyltransferase 1 0.24486
MARK2 MAP/microtubule affinity-regulating kinase 2 0.23781
FDPS farnesyl diphosphate synthase 0.236627
RHAG Rh-associated glycoprotein 0.23604
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 0.23604
FGF7 fibroblast growth factor 7 0.232317
PHF1 PHD finger protein 1 0.230931
NOTCH1 notch 1 0.230656
RNASE3 ribonuclease, RNase A family, 3 0.230382
HTN3 histatin 3 0.230382
PCNA proliferating cell nuclear antigen 0.22797
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 0.226155
PTMS parathymosin 0.2259
CHRM2 cholinergic receptor, muscarinic 2 0.224398
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.220831
PRODH proline dehydrogenase (oxidase) 1 0.220152
IL17A interleukin 17A 0.215341
NFIC nuclear factor I/C (CCAAT-binding transcription factor) 0.193332
RNASEH2A ribonuclease H2, subunit A 0.193297
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.193286
ACO2 aconitase 2, mitochondrial 0.19311
SOCS3 suppressor of cytokine signaling 3 0.18603
HMX1 H6 family homeobox 1 0.184884
AHR aryl hydrocarbon receptor 0.183358
MNX1 motor neuron and pancreas homeobox 1 0.18286
CISH cytokine inducible SH2-containing protein 0.181898
CAT catalase 0.180177
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion 0.179973
FGD1 FYVE, RhoGEF and PH domain containing 1 0.179343
AIF1 allograft inflammatory factor 1 0.178683
EPHB4 EPH receptor B4 0.1764
MX1 MX dynamin-like GTPase 1 0.175962
CLDN3 claudin 3 0.175913
FGFR2 fibroblast growth factor receptor 2 0.175763
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.175256
KAT2B K(lysine) acetyltransferase 2B 0.174379
RAP2B RAP2B, member of RAS oncogene family 0.172009
RAB1B RAB1B, member RAS oncogene family 0.171978
SAR1A secretion associated, Ras related GTPase 1A 0.171758
MATK megakaryocyte-associated tyrosine kinase 0.171663
ARF3 ADP-ribosylation factor 3 0.171631
GLO1 glyoxalase I 0.171468
AQP5 aquaporin 5 0.171274
F9 coagulation factor IX 0.170094
HMGA1 high mobility group AT-hook 1 0.170025
BMP4 bone morphogenetic protein 4 0.1696
GJB1 gap junction protein, beta 1, 32kDa 0.169494
TXN thioredoxin 0.169132
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.168874
EFNB2 ephrin-B2 0.168764
CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 0.168311
PFN4 profilin family, member 4 0.168122
ACLY ATP citrate lyase 0.167655
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 0.167537
MUT methylmalonyl CoA mutase 0.166695
TPI1 triosephosphate isomerase 1 0.166446
CFH complement factor H 0.165169
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.164769
HNMT histamine N-methyltransferase 0.164546
TPM3 tropomyosin 3 0.164091
NOTCH3 notch 3 0.162533
PFN2 profilin 2 0.162484
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.162337
PFN1 profilin 1 0.161743
GLP1R glucagon-like peptide 1 receptor 0.16149
P4HB prolyl 4-hydroxylase, beta polypeptide 0.159007
CTSA cathepsin A 0.158055
BCL2 B-cell CLL/lymphoma 2 0.158055
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.156001