photosystem ii Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center. (Gene Ontology, GO_0009523)
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Genes

188 proteins co-occuring with the photosystem ii cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
BFSP2 beaded filament structural protein 2, phakinin 3.44492
SPX spexin hormone 2.95896
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 2.10857
ARPP21 cAMP-regulated phosphoprotein, 21kDa 1.97345
SH3TC2 SH3 domain and tetratricopeptide repeats 2 1.81579
YME1L1 YME1-like 1 ATPase 1.76885
SAMHD1 SAM domain and HD domain 1 1.76496
SMAD4 SMAD family member 4 1.53896
SOD2 superoxide dismutase 2, mitochondrial 1.4774
CAT catalase 1.47004
CPA1 carboxypeptidase A1 (pancreatic) 1.3896
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.36968
GPR152 G protein-coupled receptor 152 1.35485
TSPO translocator protein (18kDa) 1.31843
MGAM maltase-glucoamylase 1.28729
GSR glutathione reductase 1.26234
CPA2 carboxypeptidase A2 (pancreatic) 1.23713
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 1.15364
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 1.15364
NOL9 nucleolar protein 9 0.963107
BLID BH3-like motif containing, cell death inducer 0.935016
FDXR ferredoxin reductase 0.925135
FBP1 fructose-1,6-bisphosphatase 1 0.879173
TXN thioredoxin 0.870426
MDH1 malate dehydrogenase 1, NAD (soluble) 0.869046
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.849287
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 0.831843
EFS embryonal Fyn-associated substrate 0.811652
PPOX protoporphyrinogen oxidase 0.807065
CLEC3A C-type lectin domain family 3, member A 0.801104
CLEC2B C-type lectin domain family 2, member B 0.784156
CLEC10A C-type lectin domain family 10, member A 0.777755
FES FES proto-oncogene, tyrosine kinase 0.759524
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.741416
MED4 mediator complex subunit 4 0.738263
KRT86 keratin 86, type II 0.731973
HTRA1 HtrA serine peptidase 1 0.730628
HPD 4-hydroxyphenylpyruvate dioxygenase 0.713238
GMPPB GDP-mannose pyrophosphorylase B 0.699543
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.698663
SRI sorcin 0.65345
TAS1R1 taste receptor, type 1, member 1 0.65001
CDSN corneodesmosin 0.640145
ANGPTL6 angiopoietin-like 6 0.639289
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.632024
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.628613
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.621379
PSD4 pleckstrin and Sec7 domain containing 4 0.608663
AURKAIP1 aurora kinase A interacting protein 1 0.607818
CACNB4 calcium channel, voltage-dependent, beta 4 subunit 0.606128
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 0.606128
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A 0.600644
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 0.593072
HAO2 hydroxyacid oxidase 2 (long chain) 0.591392
BLVRB biliverdin reductase B 0.582594
NPDC1 neural proliferation, differentiation and control, 1 0.579669
TRO trophinin 0.574244
DNAH8 dynein, axonemal, heavy chain 8 0.573828
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.572162
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.570913
INF2 inverted formin, FH2 and WH2 domain containing 0.564262
PC pyruvate carboxylase 0.559285
ZBTB48 zinc finger and BTB domain containing 48 0.555559
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.548122
PSD3 pleckstrin and Sec7 domain containing 3 0.539472
LRRC25 leucine rich repeat containing 25 0.537827
GLUL glutamate-ammonia ligase 0.533719
CCDC130 coiled-coil domain containing 130 0.510826
TGM1 transglutaminase 1 0.50879
TSKU tsukushi, small leucine rich proteoglycan 0.502693
POGK pogo transposable element with KRAB domain 0.48287
CDIP1 cell death-inducing p53 target 1 0.481661
PTGDR prostaglandin D2 receptor (DP) 0.470005
FECH ferrochelatase 0.464798
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 0.458404
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.455214
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.448848
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.448054
PSG1 pregnancy specific beta-1-glycoprotein 1 0.436565
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 0.429465
CELA2A chymotrypsin-like elastase family, member 2A 0.405971
MN1 meningioma (disrupted in balanced translocation) 1 0.401693
CAMTA1 calmodulin binding transcription activator 1 0.399363
CFH complement factor H 0.395098
THEG theg spermatid protein 0.394323
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.394323
PERP PERP, TP53 apoptosis effector 0.388909
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.380814
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 0.379276
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 0.379276
GLDC glycine dehydrogenase (decarboxylating) 0.378507
EIF5A eukaryotic translation initiation factor 5A 0.376586
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 0.374666
C3ORF18 chromosome 3 open reading frame 18 0.372366
TCEA2 transcription elongation factor A (SII), 2 0.366241
GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 0.354042
CCDC62 coiled-coil domain containing 62 0.352901
RPL22 ribosomal protein L22 0.352901
COG8 component of oligomeric golgi complex 8 0.352142
PRSS30P protease, serine, 30, pseudogene 0.349863
UNK unkempt family zinc finger 0.345692
MIDN midnolin 0.342285
PGP phosphoglycolate phosphatase 0.338128
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.334733
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.333602
PATZ1 POZ (BTB) and AT hook containing zinc finger 1 0.333602
ADRA1D adrenoceptor alpha 1D 0.333225
FDPS farnesyl diphosphate synthase 0.328332
CTU1 cytosolic thiouridylase subunit 1 0.328332
RNF19B ring finger protein 19B 0.327956
HSPA4 heat shock 70kDa protein 4 0.326829
ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19 0.325327
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.319328
ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial 0.316708
PRRC2A proline-rich coiled-coil 2A 0.310732
NADK NAD kinase 0.309613
LAP3 leucine aminopeptidase 3 0.305515
STOM stomatin 0.305143
PLA2G1B phospholipase A2, group IB (pancreas) 0.298826
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 0.293637
MCM8 minichromosome maintenance complex component 8 0.290678
RHOA ras homolog family member A 0.285876
LRP10 low density lipoprotein receptor-related protein 10 0.284032
APC2 adenomatosis polyposis coli 2 0.281453
TKT transketolase 0.280349
PXT1 peroxisomal, testis specific 1 0.277774
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b) 0.276304
CARS cysteinyl-tRNA synthetase 0.268969
LRRC4C leucine rich repeat containing 4C 0.26239
ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 0.257652
PGAP3 post-GPI attachment to proteins 3 0.255834
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 0.25547
PER2 period circadian clock 2 0.253653
ZBTB17 zinc finger and BTB domain containing 17 0.251476
PRKACB protein kinase, cAMP-dependent, catalytic, beta 0.249664
SPIN3 spindlin family, member 3 0.249302
RPS19 ribosomal protein S19 0.247854
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 0.247492
MESDC2 mesoderm development candidate 2 0.246769
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.246046
IFITM1 interferon induced transmembrane protein 1 0.242437
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.242437
GSX1 GS homeobox 1 0.241356
CRYZ crystallin, zeta (quinone reductase) 0.238119
UBE2D4 ubiquitin-conjugating enzyme E2D 4 (putative) 0.235966
FBP2 fructose-1,6-bisphosphatase 2 0.234891
NCR3 natural cytotoxicity triggering receptor 3 0.233817
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.233101
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1 0.229176
GFM2 G elongation factor, mitochondrial 2 0.228819
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 0.225267
GUSB glucuronidase, beta 0.223497
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.221378
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.21716
TALDO1 transaldolase 1 0.215063
LRP5 low density lipoprotein receptor-related protein 5 0.214714
GPANK1 G patch domain and ankyrin repeats 1 0.214366
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.213322
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.211587
NQO2 NAD(P)H dehydrogenase, quinone 2 0.208137
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.206082
NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 0.20574
FLT1 fms-related tyrosine kinase 1 0.203699
LPO lactoperoxidase 0.199659
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 0.198991
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.184241
FLNB filamin B, beta 0.183328
AKTIP AKT interacting protein 0.181524
LRP4 low density lipoprotein receptor-related protein 4 0.179459
PPCS phosphopantothenoylcysteine synthetase 0.178588
TPI1 triosephosphate isomerase 1 0.177724
ALB albumin 0.175745
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y 0.172735
UBE2T ubiquitin-conjugating enzyme E2T 0.171937
SPTA1 spectrin, alpha, erythrocytic 1 0.171937
SMS spermine synthase 0.17141
HSPB8 heat shock 22kDa protein 8 0.169859
HMBS hydroxymethylbilane synthase 0.168598
PRDX6 peroxiredoxin 6 0.1632
RPS14 ribosomal protein S14 0.161484
TRIM10 tripartite motif containing 10 0.159658
GSTA3 glutathione S-transferase alpha 3 0.159268
GSTA2 glutathione S-transferase alpha 2 0.158502
GSTA4 glutathione S-transferase alpha 4 0.158502
PRODH proline dehydrogenase (oxidase) 1 0.15776
GSTA1 glutathione S-transferase alpha 1 0.157397
TRIM26 tripartite motif containing 26 0.157039
CXXC5 CXXC finger protein 5 0.156863