photosystem i Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation). (Gene Ontology, GO_0009522)
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120 proteins co-occuring with the photosystem i cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
BFSP2 beaded filament structural protein 2, phakinin 1.85045
GPR152 G protein-coupled receptor 152 1.73435
FDXR ferredoxin reductase 1.70014
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.62945
FES FES proto-oncogene, tyrosine kinase 1.47231
ARPP21 cAMP-regulated phosphoprotein, 21kDa 1.26656
SPX spexin hormone 1.11021
TSPO translocator protein (18kDa) 1.06448
CELA2A chymotrypsin-like elastase family, member 2A 1.00645
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 0.991225
F2 coagulation factor II (thrombin) 0.959268
SAMHD1 SAM domain and HD domain 1 0.94211
WBP1L WW domain binding protein 1-like 0.901353
TXN thioredoxin 0.843778
SOD2 superoxide dismutase 2, mitochondrial 0.828171
PERP PERP, TP53 apoptosis effector 0.822664
MGAM maltase-glucoamylase 0.813946
CARS2 cysteinyl-tRNA synthetase 2, mitochondrial (putative) 0.780954
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.762707
CLEC3A C-type lectin domain family 3, member A 0.752716
CCDC130 coiled-coil domain containing 130 0.750452
UNK unkempt family zinc finger 0.747285
EFS embryonal Fyn-associated substrate 0.739614
CLEC2B C-type lectin domain family 2, member B 0.736014
PSCA prostate stem cell antigen 0.733319
CLEC10A C-type lectin domain family 10, member A 0.73018
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 0.707924
CPA1 carboxypeptidase A1 (pancreatic) 0.695148
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.69164
MDH1 malate dehydrogenase 1, NAD (soluble) 0.685954
NFU1 NFU1 iron-sulfur cluster scaffold 0.683771
PPOX protoporphyrinogen oxidase 0.671593
AIP aryl hydrocarbon receptor interacting protein 0.644429
FDX1 ferredoxin 1 0.631598
SCNN1A sodium channel, non voltage gated 1 alpha subunit 0.622654
SMAD4 SMAD family member 4 0.622654
CDSN corneodesmosin 0.60655
CAT catalase 0.584686
CTU1 cytosolic thiouridylase subunit 1 0.571329
CLCN2 chloride channel, voltage-sensitive 2 0.565923
PC pyruvate carboxylase 0.549773
PGP phosphoglycolate phosphatase 0.549773
SCNN1B sodium channel, non voltage gated 1 beta subunit 0.538238
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 0.52675
FPGT fucose-1-phosphate guanylyltransferase 0.523476
DNAH8 dynein, axonemal, heavy chain 8 0.523067
CPA2 carboxypeptidase A2 (pancreatic) 0.52225
C1ORF167 chromosome 1 open reading frame 167 0.521841
STK16 serine/threonine kinase 16 0.51327
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.503506
APC2 adenomatosis polyposis coli 2 0.487711
PNKD paroxysmal nonkinesigenic dyskinesia 0.471208
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 0.469604
FBP1 fructose-1,6-bisphosphatase 1 0.456809
CRYZ crystallin, zeta (quinone reductase) 0.448054
ZNF197 zinc finger protein 197 0.444482
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.442896
FBP2 fructose-1,6-bisphosphatase 2 0.436565
GFM2 G elongation factor, mitochondrial 2 0.429859
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.427497
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.40675
SSR2 signal sequence receptor, beta (translocon-associated protein beta) 0.404804
COQ6 coenzyme Q6 monooxygenase 0.404415
NPB neuropeptide B 0.401693
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 0.399363
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.397811
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.397811
MED4 mediator complex subunit 4 0.387751
GGCX gamma-glutamyl carboxylase 0.382354
PSPH phosphoserine phosphatase 0.377738
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6 0.352142
CXXC5 CXXC finger protein 5 0.336241
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.332095
ALB albumin 0.331719
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 0.311478
USP4 ubiquitin specific peptidase 4 (proto-oncogene) 0.309613
PPP1R8 protein phosphatase 1, regulatory subunit 8 0.306632
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.305143
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.301425
SAR1B secretion associated, Ras related GTPase 1B 0.299197
HACD3 3-hydroxyacyl-CoA dehydratase 3 0.296972
AK3 adenylate kinase 3 0.294378
GUSB glucuronidase, beta 0.291787
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 0.284032
BLVRB biliverdin reductase B 0.281085
SIX2 SIX homeobox 2 0.279245
CNTN3 contactin 3 (plasmacytoma associated) 0.276304
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 0.267871
GLUL glutamate-ammonia ligase 0.26385
PPAN peter pan homolog (Drosophila) 0.253653
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 0.251476
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.246046
ACP1 acid phosphatase 1, soluble 0.24424
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.237042
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.236683
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.236324
LAG3 lymphocyte-activation gene 3 0.218563
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.214714
SDHAF2 succinate dehydrogenase complex assembly factor 2 0.212627
CA1 carbonic anhydrase I 0.208825
ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 0.205059
LHFPL5 lipoma HMGIC fusion partner-like 5 0.198658
EP400 E1A binding protein p400 0.193394
ASL argininosuccinate lyase 0.190495
PTGDR prostaglandin D2 receptor (DP) 0.188905
CASP7 caspase 7, apoptosis-related cysteine peptidase 0.187333
NOD2 nucleotide-binding oligomerization domain containing 2 0.182122
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.179459
LYZ lysozyme 0.179459
HPD 4-hydroxyphenylpyruvate dioxygenase 0.179459
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.172735
CPLX1 complexin 1 0.171937
NT5C1A 5'-nucleotidase, cytosolic IA 0.166884
PARVA parvin, alpha 0.1632
ECI1 enoyl-CoA delta isomerase 1 0.161484
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.161275
CGA glycoprotein hormones, alpha polypeptide 0.160053
EPGN epithelial mitogen 0.157039
ALDOC aldolase C, fructose-bisphosphate 0.156863
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.156688