photoreceptor connecting cilium Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nonmotile primary cilium that has a 9+0 microtubule array and forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments. (Gene Ontology, GO_0032391)
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Genes

56 proteins co-occuring with the photoreceptor connecting cilium cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RPGR retinitis pigmentosa GTPase regulator 2.3312
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 1.84908
MAK male germ cell-associated kinase 1.62295
LCA5 Leber congenital amaurosis 5 1.51581
POC1B POC1 centriolar protein B 1.40522
KIF3A kinesin family member 3A 1.37741
FAM161A family with sequence similarity 161, member A 1.34828
SDCCAG8 serologically defined colon cancer antigen 8 1.28516
KIF17 kinesin family member 17 1.26339
MYO7A myosin VIIA 1.22828
KIF3C kinesin family member 3C 1.20344
IFT88 intraflagellar transport 88 1.17055
PDZD7 PDZ domain containing 7 1.16235
FRMD6 FERM domain containing 6 1.0812
CEP290 centrosomal protein 290kDa 1.07917
APOPT1 apoptogenic 1, mitochondrial 1.07157
ARL3 ADP-ribosylation factor-like 3 1.02231
FAM161B family with sequence similarity 161, member B 0.99956
CETN2 centrin, EF-hand protein, 2 0.998577
RSPH9 radial spoke head 9 homolog (Chlamydomonas) 0.987806
IQCB1 IQ motif containing B1 0.952573
IFT20 intraflagellar transport 20 0.945907
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.898572
ADGRV1 adhesion G protein-coupled receptor V1 0.892556
CETN1 centrin, EF-hand protein, 1 0.887936
KIF3B kinesin family member 3B 0.881477
RP2 retinitis pigmentosa 2 (X-linked recessive) 0.849287
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1 0.754983
CC2D2A coiled-coil and C2 domain containing 2A 0.741416
NINL ninein-like 0.740965
WDR19 WD repeat domain 19 0.716791
EFHC1 EF-hand domain (C-terminal) containing 1 0.70439
IFT57 intraflagellar transport 57 0.677238
MKKS McKusick-Kaufman syndrome 0.659913
RHO rhodopsin 0.652159
DFNB31 deafness, autosomal recessive 31 0.617133
NPHP4 nephronophthisis 4 0.596014
NPHP1 nephronophthisis 1 (juvenile) 0.534951
OFD1 oral-facial-digital syndrome 1 0.517348
CRB1 crumbs family member 1, photoreceptor morphogenesis associated 0.5149
USH1C Usher syndrome 1C (autosomal recessive, severe) 0.511233
EXOC5 exocyst complex component 5 0.508383
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.479245
MATN3 matrilin 3 0.478843
PCDH15 protocadherin-related 15 0.465198
GRK1 G protein-coupled receptor kinase 1 0.437356
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4 0.428678
ROM1 retinal outer segment membrane protein 1 0.389296
DCTN2 dynactin 2 (p50) 0.373132
RAB8A RAB8A, member RAS oncogene family 0.339261
AMD1 adenosylmethionine decarboxylase 1 0.320826
NUMB numb homolog (Drosophila) 0.300682
SMC3 structural maintenance of chromosomes 3 0.253653
GPR162 G protein-coupled receptor 162 0.228819
CETN3 centrin, EF-hand protein, 3 0.209513
MMP8 matrix metallopeptidase 8 0.187333