phagocytic vesicle membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The lipid bilayer surrounding a phagocytic vesicle. (Gene Ontology, GO_0030670)
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Genes

90 proteins co-occuring with the phagocytic vesicle membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 1.37907
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.17055
LAMP1 lysosomal-associated membrane protein 1 1.15825
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 1.01883
STX18 syntaxin 18 0.951142
EEA1 early endosome antigen 1 0.90089
ESX1 ESX homeobox 1 0.871346
ANXA3 annexin A3 0.847451
CORO1A coronin, actin binding protein, 1A 0.839646
SLC48A1 solute carrier family 48 (heme transporter), member 1 0.830925
SYTL1 synaptotagmin-like 1 0.806148
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.783241
PRF1 perforin 1 (pore forming protein) 0.665096
GAPVD1 GTPase activating protein and VPS9 domains 1 0.659913
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 0.646145
SYK spleen tyrosine kinase 0.630318
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated) 0.61883
PI3 peptidase inhibitor 3, skin-derived 0.608663
RAB20 RAB20, member RAS oncogene family 0.602331
SNX33 sorting nexin 33 0.599381
IRGM immunity-related GTPase family, M 0.583849
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 0.571329
ADGRL4 adhesion G protein-coupled receptor L4 0.570496
NAGK N-acetylglucosamine kinase 0.565923
HOOK3 hook microtubule-tethering protein 3 0.555145
TLR2 toll-like receptor 2 0.553078
CLCN1 chloride channel, voltage-sensitive 1 0.54194
BAIAP2L1 BAI1-associated protein 2-like 1 0.532488
FGR FGR proto-oncogene, Src family tyrosine kinase 0.49661
BTK Bruton agammaglobulinemia tyrosine kinase 0.494585
MPO myeloperoxidase 0.487307
CALCOCO2 calcium binding and coiled-coil domain 2 0.47844
RAB5B RAB5B, member RAS oncogene family 0.457208
VPS33B vacuolar protein sorting 33 homolog B (yeast) 0.455613
SNX3 sorting nexin 3 0.431435
HCK HCK proto-oncogene, Src family tyrosine kinase 0.424745
PLD2 phospholipase D2 0.424745
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.40247
RILP Rab interacting lysosomal protein 0.400916
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.400527
INPP5B inositol polyphosphate-5-phosphatase, 75kDa 0.399751
RAB5A RAB5A, member RAS oncogene family 0.390841
NOXA1 NADPH oxidase activator 1 0.365095
M6PR mannose-6-phosphate receptor (cation dependent) 0.353282
FCN1 ficolin (collagen/fibrinogen domain containing) 1 0.352142
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.336996
NOXO1 NADPH oxidase organizer 1 0.329084
CTSD cathepsin D 0.324576
RTKN rhotekin 0.310358
CLIC1 chloride intracellular channel 1 0.309986
CYBA cytochrome b-245, alpha polypeptide 0.309613
CD63 CD63 molecule 0.309613
DNAI1 dynein, axonemal, intermediate chain 1 0.302912
NOD2 nucleotide-binding oligomerization domain containing 2 0.29994
HLA-B major histocompatibility complex, class I, B 0.293267
PKN1 protein kinase N1 0.27998
INPP5D inositol polyphosphate-5-phosphatase, 145kDa 0.275202
DCTN1 dynactin 1 0.269335
DNAH8 dynein, axonemal, heavy chain 8 0.268969
TMSB4X thymosin beta 4, X-linked 0.266042
SNX9 sorting nexin 9 0.263485
EZR ezrin 0.253653
NT5E 5'-nucleotidase, ecto (CD73) 0.234174
PGD phosphogluconate dehydrogenase 0.234174
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3 0.233459
ATP11A ATPase, class VI, type 11A 0.233459
RAB10 RAB10, member RAS oncogene family 0.230601
PGAM1 phosphoglycerate mutase 1 (brain) 0.227752
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.22279
COPE coatomer protein complex, subunit epsilon 0.220321
CD1B CD1b molecule 0.212627
TRAF1 TNF receptor-associated factor 1 0.208825
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 0.201335
MYO10 myosin X 0.189222
IFI30 interferon, gamma-inducible protein 30 0.179459
TMEM173 transmembrane protein 173 0.177724
MYO1B myosin IB 0.177724
MBTPS1 membrane-bound transcription factor peptidase, site 1 0.176305
LAMP2 lysosomal-associated membrane protein 2 0.175188
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.174087
LGALS3 lectin, galactoside-binding, soluble, 3 0.174087
YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 0.169859
TLR9 toll-like receptor 9 0.168847
MVP major vault protein 0.161275
PLD1 phospholipase D1, phosphatidylcholine-specific 0.161275
MCOLN1 mucolipin 1 0.158502
BPI bactericidal/permeability-increasing protein 0.142805
RAB27A RAB27A, member RAS oncogene family 0.140168
CTSG cathepsin G 0.139497
CR1 complement component (3b/4b) receptor 1 (Knops blood group) 0.13886