perinuclear endoplasmic reticulum Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes. (Gene Ontology, GO_0097038)
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Genes

42 proteins co-occuring with the perinuclear endoplasmic reticulum cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like 1.36747
SNTG1 syntrophin, gamma 1 1.00054
PPBPP1 pro-platelet basic protein pseudogene 1 0.910182
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.85342
DIAPH1 diaphanous-related formin 1 0.780497
RER1 retention in endoplasmic reticulum sorting receptor 1 0.677238
CANX calnexin 0.642715
GJA8 gap junction protein, alpha 8, 50kDa 0.631598
FER fer (fps/fes related) tyrosine kinase 0.626483
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.620104
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.596014
DGAT1 diacylglycerol O-acyltransferase 1 0.548535
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.50635
UGCG UDP-glucose ceramide glucosyltransferase 0.504724
GPER1 G protein-coupled estrogen receptor 1 0.439728
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) 0.435775
FLT3 fms-related tyrosine kinase 3 0.391228
NCSTN nicastrin 0.376202
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.375434
SDC4 syndecan 4 0.372366
PABPC1 poly(A) binding protein, cytoplasmic 1 0.354042
RAB1A RAB1A, member RAS oncogene family 0.353282
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.342664
UGT1A1 UDP glucuronosyltransferase 1 family, polypeptide A1 0.333225
GPI glucose-6-phosphate isomerase 0.314839
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 0.299197
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.248578
KAT5 K(lysine) acetyltransferase 5 0.238119
G6PC glucose-6-phosphatase, catalytic subunit 0.235607
CDC20 cell division cycle 20 0.227041
ATF4 activating transcription factor 4 0.22385
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) 0.219617
ANPEP alanyl (membrane) aminopeptidase 0.219617
FMN1 formin 1 0.213322
ARF1 ADP-ribosylation factor 1 0.21124
ATF6 activating transcription factor 6 0.210894
BMP4 bone morphogenetic protein 4 0.205399
ERN1 endoplasmic reticulum to nucleus signaling 1 0.191777
PSEN1 presenilin 1 0.184853
XBP1 X-box binding protein 1 0.167856
CASR calcium-sensing receptor 0.166884
VIP vasoactive intestinal peptide 0.159462