perikaryon Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The portion of the cell soma (cell body) that excludes the nucleus. (Gene Ontology, GO_0043204)
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Genes

206 proteins co-occuring with the perikaryon cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TH tyrosine hydroxylase 2.44606
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 2.16028
NPY neuropeptide Y 2.11512
TAC1 tachykinin, precursor 1 2.1042
SST somatostatin 2.094
CHAT choline O-acetyltransferase 1.95162
NTS neurotensin 1.90771
CRH corticotropin releasing hormone 1.89593
NPS neuropeptide S 1.85593
GAL galanin/GMAP prepropeptide 1.7695
ACHE acetylcholinesterase (Yt blood group) 1.74447
POMC proopiomelanocortin 1.67143
PDYN prodynorphin 1.62472
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 1.57474
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 1.55367
CALCA calcitonin-related polypeptide alpha 1.55197
PNMT phenylethanolamine N-methyltransferase 1.50678
CCK cholecystokinin 1.46722
PVALB parvalbumin 1.45251
GHRH growth hormone releasing hormone 1.38849
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 1.35594
CALB1 calbindin 1, 28kDa 1.34719
VIP vasoactive intestinal peptide 1.3125
TRH thyrotropin-releasing hormone 1.30282
NGF nerve growth factor (beta polypeptide) 1.25443
AVP arginine vasopressin 1.15364
NEFH neurofilament, heavy polypeptide 1.13881
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 1.11072
FOS FBJ murine osteosarcoma viral oncogene homolog 1.10154
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 1.05186
CALB2 calbindin 2 1.03479
MAP2 microtubule-associated protein 2 1.00843
GRP gastrin-releasing peptide 0.992204
PENK proenkephalin 0.978559
OPRM1 opioid receptor, mu 1 0.976135
SYP synaptophysin 0.955917
CARTPT CART prepropeptide 0.955439
RICTOR RPTOR independent companion of MTOR, complex 2 0.940689
MAPT microtubule-associated protein tau 0.938795
PRL prolactin 0.935016
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.905067
PPY pancreatic polypeptide 0.878712
GLS2 glutaminase 2 (liver, mitochondrial) 0.857095
CA4 carbonic anhydrase IV 0.852961
GLS glutaminase 0.852042
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.81624
NEFM neurofilament, medium polypeptide 0.804772
TPH1 tryptophan hydroxylase 1 0.783698
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.771819
HCRT hypocretin (orexin) neuropeptide precursor 0.760887
ENO2 enolase 2 (gamma, neuronal) 0.759978
NGFR nerve growth factor receptor 0.725258
MBP myelin basic protein 0.723472
GFAP glial fibrillary acidic protein 0.718125
MAP1B microtubule-associated protein 1B 0.715902
BCHE butyrylcholinesterase 0.715014
UTS2 urotensin 2 0.713682
BDNF brain-derived neurotrophic factor 0.710579
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.692955
PRLH prolactin releasing hormone 0.665096
OXT oxytocin/neurophysin I prepropeptide 0.657757
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.607395
GAST gastrin 0.590553
CHGA chromogranin A 0.589295
SAG S-antigen; retina and pineal gland (arrestin) 0.582594
CEND1 cell cycle exit and neuronal differentiation 1 0.573828
INA internexin neuronal intermediate filament protein, alpha 0.571745
CDK5 cyclin-dependent kinase 5 0.570496
NTF4 neurotrophin 4 0.567169
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.565923
GRIK1 glutamate receptor, ionotropic, kainate 1 0.565092
ADRA2A adrenoceptor alpha 2A 0.551425
GRM1 glutamate receptor, metabotropic 1 0.548122
PHF1 PHD finger protein 1 0.54771
NPPA natriuretic peptide A 0.536594
HMOX2 heme oxygenase 2 0.53454
PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C 0.531668
AGRP agouti related neuropeptide 0.528798
PALM paralemmin 0.527569
NTF3 neurotrophin 3 0.52675
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa 0.526341
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like 0.524294
SNCB synuclein, beta 0.523476
SYN1 synapsin I 0.511233
APP amyloid beta (A4) precursor protein 0.50879
ABAT 4-aminobutyrate aminotransferase 0.489731
GLUL glutamate-ammonia ligase 0.485289
NMU neuromedin U 0.480453
GLG1 golgi glycoprotein 1 0.47442
CRHR1 corticotropin releasing hormone receptor 1 0.464397
GDNF glial cell derived neurotrophic factor 0.460401
ESR2 estrogen receptor 2 (ER beta) 0.45641
TUBA1A tubulin, alpha 1a 0.443292
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.442104
NCAM1 neural cell adhesion molecule 1 0.441708
CRCP CGRP receptor component 0.433407
ACPP acid phosphatase, prostate 0.428284
CRHBP corticotropin releasing hormone binding protein 0.426711
ESR1 estrogen receptor 1 0.424353
MAG myelin associated glycoprotein 0.42396
CLDN11 claudin 11 0.422389
UCN urocortin 0.42082
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled 0.414164
TECTA tectorin alpha 0.412601
OPN4 opsin 4 0.405193
KRT79 keratin 79, type II 0.404804
EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 0.401304
SCG2 secretogranin II 0.397423
GRM5 glutamate receptor, metabotropic 5 0.395873
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.391615
ADRA2C adrenoceptor alpha 2C 0.384665
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.38428
SOD2 superoxide dismutase 2, mitochondrial 0.382354
NEFL neurofilament, light polypeptide 0.381199
SDF4 stromal cell derived factor 4 0.380045
MAP4 microtubule-associated protein 4 0.376586
GAP43 growth associated protein 43 0.371216
TRPV1 transient receptor potential cation channel, subfamily V, member 1 0.368153
MT3 metallothionein 3 0.365477
PYY peptide YY 0.355563
GCG glucagon 0.355183
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 0.354802
OTOS otospiralin 0.349863
CHRM4 cholinergic receptor, muscarinic 4 0.343042
SYNPR synaptoporin 0.336619
DES desmin 0.332848
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 0.326078
UTS2R urotensin 2 receptor 0.324576
DNM2 dynamin 2 0.324201
ELSPBP1 epididymal sperm binding protein 1 0.318205
CRYAB crystallin, alpha B 0.318205
GRM2 glutamate receptor, metabotropic 2 0.314839
HDC histidine decarboxylase 0.313718
PSPN persephin 0.310732
INS insulin 0.303655
MC3R melanocortin 3 receptor 0.29586
IARS isoleucyl-tRNA synthetase 0.295489
QPCT glutaminyl-peptide cyclotransferase 0.294748
ALPP alkaline phosphatase, placental 0.289199
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.28846
IGF1 insulin-like growth factor 1 (somatomedin C) 0.285876
ALB albumin 0.278877
GYPE glycophorin E (MNS blood group) 0.276304
PALMD palmdelphin 0.275202
NOS1 nitric oxide synthase 1 (neuronal) 0.274468
UTS2B urotensin 2B 0.273734
DLEU2L deleted in lymphocytic leukemia 2-like 0.273
ALPPL2 alkaline phosphatase, placental-like 2 0.268603
ALPL alkaline phosphatase, liver/bone/kidney 0.268237
TACR1 tachykinin receptor 1 0.267139
GIGYF2 GRB10 interacting GYF protein 2 0.259473
AIF1 allograft inflammatory factor 1 0.257289
CDAN1 codanin 1 0.249302
GCH1 GTP cyclohydrolase 1 0.248578
CTSD cathepsin D 0.247492
EPM2AIP1 EPM2A (laforin) interacting protein 1 0.247492
NUCB2 nucleobindin 2 0.246046
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.246046
CA1 carbonic anhydrase I 0.243879
NPAT nuclear protein, ataxia-telangiectasia locus 0.242076
QKI QKI, KH domain containing, RNA binding 0.240636
CNR1 cannabinoid receptor 1 (brain) 0.240276
NLN neurolysin (metallopeptidase M3 family) 0.237042
GUCY2C guanylate cyclase 2C 0.237042
LEP leptin 0.234891
CA2 carbonic anhydrase II 0.234533
MAOB monoamine oxidase B 0.230958
IGKV3-20 immunoglobulin kappa variable 3-20 0.230958
NPR1 natriuretic peptide receptor 1 0.229176
MLN motilin 0.228108
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 0.227041
DPP7 dipeptidyl-peptidase 7 0.226331
NES nestin 0.225976
CHRM1 cholinergic receptor, muscarinic 1 0.224558
GALP galanin-like peptide 0.224558
ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 0.219969
CTSS cathepsin S 0.215063
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.209169
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime 0.207451
PRNP prion protein 0.202346
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.199659
TTK TTK protein kinase 0.1921
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 0.184547
CINP cyclin-dependent kinase 2 interacting protein 0.181227
UBL5 ubiquitin-like 5 0.18093
GH1 growth hormone 1 0.180339
DST dystonin 0.180045
CNGA4 cyclic nucleotide gated channel alpha 4 0.178877
RHOD ras homolog family member D 0.17687
ACE angiotensin I converting enzyme 0.175188
GNRHR2 gonadotropin-releasing hormone (type 2) receptor 2, pseudogene 0.174911
TPP1 tripeptidyl peptidase I 0.174087
ARTN artemin 0.171937
FGF2 fibroblast growth factor 2 (basic) 0.170888
HTT huntingtin 0.169604
THY1 Thy-1 cell surface antigen 0.166405
FTL ferritin, light polypeptide 0.166167
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.165231
FTH1 ferritin, heavy polypeptide 1 0.165
TARDBP TAR DNA binding protein 0.16342
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) 0.161905
JUN jun proto-oncogene 0.160658
PDE8A phosphodiesterase 8A 0.159658
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.159268
PTDSS2 phosphatidylserine synthase 2 0.157578
PAM peptidylglycine alpha-amidating monooxygenase 0.157578