pericellular basket Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Ramification of basket cell axon surrounding cell bodies, forming the characteristic pericellular baskets from which the cell class derives its name. (Gene Ontology, GO_1990030)
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29 proteins co-occuring with the pericellular basket cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NPY neuropeptide Y 1.25917
CALB1 calbindin 1, 28kDa 1.22776
TAC1 tachykinin, precursor 1 1.16081
CALCA calcitonin-related polypeptide alpha 1.07968
SST somatostatin 0.974682
TH tyrosine hydroxylase 0.962146
CALB2 calbindin 2 0.887936
VIP vasoactive intestinal peptide 0.851583
CHAT choline O-acetyltransferase 0.817616
PVALB parvalbumin 0.769995
GAL galanin/GMAP prepropeptide 0.749999
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.692078
CARTPT CART prepropeptide 0.672894
NPS neuropeptide S 0.66164
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4 0.642286
GRP gastrin-releasing peptide 0.624781
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.570913
KCNA2 potassium channel, voltage gated shaker related subfamily A, member 2 0.570496
PDYN prodynorphin 0.50879
NGF nerve growth factor (beta polypeptide) 0.4425
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.368536
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 0.284769
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.25438
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 0.253653
DLG4 discs, large homolog 4 (Drosophila) 0.244962
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 0.235966
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.234174
TPH1 tryptophan hydroxylase 1 0.197662
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 0.159856