parallel fiber Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A parallel fiber results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium. (Gene Ontology, GO_1990032)
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Genes

152 proteins co-occuring with the parallel fiber cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CBLN1 cerebellin 1 precursor 2.13259
GRM1 glutamate receptor, metabotropic 1 2.12094
GRID2 glutamate receptor, ionotropic, delta 2 1.8897
GLUD2 glutamate dehydrogenase 2 1.83747
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1.57416
SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 1.52428
GRM4 glutamate receptor, metabotropic 4 1.29371
CNR1 cannabinoid receptor 1 (brain) 1.2497
DSE dermatan sulfate epimerase 1.21738
CALB1 calbindin 1, 28kDa 1.17568
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 1.09442
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 1.05892
CALB2 calbindin 2 1.03378
ELL elongation factor RNA polymerase II 1.00991
DAGLA diacylglycerol lipase, alpha 1.00695
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.994162
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like) 0.97565
CBLN3 cerebellin 3 precursor 0.975166
CNTN2 contactin 2 (axonal) 0.935488
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.916243
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.909251
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.897646
DAGLB diacylglycerol lipase, beta 0.876869
CBLN2 cerebellin 2 precursor 0.848369
CST11 cystatin 11 0.846073
PICK1 protein interacting with PRKCA 1 0.829089
BDNF brain-derived neurotrophic factor 0.813028
DNER delta/notch-like EGF repeat containing 0.785986
PVALB parvalbumin 0.731076
GRM2 glutamate receptor, metabotropic 2 0.73018
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.716346
PLCB4 phospholipase C, beta 4 0.689888
KCNC1 potassium channel, voltage gated Shaw related subfamily C, member 1 0.674196
EBF2 early B-cell factor 2 0.661208
GRIA3 glutamate receptor, ionotropic, AMPA 3 0.652159
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7 0.646574
CNTN6 contactin 6 0.620104
NXN nucleoredoxin 0.616285
UNC13C unc-13 homolog C (C. elegans) 0.603596
PCP4 Purkinje cell protein 4 0.598117
MGLL monoglyceride lipase 0.596855
FOXP4 forkhead box P4 0.587618
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 0.576747
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.566754
CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit 0.563432
RICTOR RPTOR independent companion of MTOR, complex 2 0.563017
AEN apoptosis enhancing nuclease 0.556387
TRPC3 transient receptor potential cation channel, subfamily C, member 3 0.54194
NTF3 neurotrophin 3 0.530847
CADPS Ca++-dependent secretion activator 0.517756
PPP1R17 protein phosphatase 1, regulatory subunit 17 0.509197
FAT2 FAT atypical cadherin 2 0.506757
SLC4A10 solute carrier family 4, sodium bicarbonate transporter, member 10 0.50107
CRH corticotropin releasing hormone 0.500664
CAPS2 calcyphosine 2 0.497015
DAB2IP DAB2 interacting protein 0.482467
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.481661
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 0.47844
RORA RAR-related orphan receptor A 0.477233
CADPS2 Ca++-dependent secretion activator 2 0.476831
GUCY2C guanylate cyclase 2C 0.4676
SYP synaptophysin 0.462398
NPR1 natriuretic peptide receptor 1 0.459203
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.458803
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 0.454418
PDE10A phosphodiesterase 10A 0.441708
RBM10 RNA binding motif protein 10 0.44052
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.434591
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.427891
ATXN1 ataxin 1 0.425138
GDF5 growth differentiation factor 5 0.42396
RIMS1 regulating synaptic membrane exocytosis 1 0.42082
SLC16A4 solute carrier family 16, member 4 0.419252
GRM3 glutamate receptor, metabotropic 3 0.413773
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.397423
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.392388
PRELP proline/arginine-rich end leucine-rich repeat protein 0.387365
PSPH phosphoserine phosphatase 0.38428
SCN1B sodium channel, voltage gated, type I beta subunit 0.38428
EFNB1 ephrin-B1 0.378891
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific) 0.378507
RELN reelin 0.376586
ZIC2 Zic family member 2 0.370833
GPR4 G protein-coupled receptor 4 0.365095
GRIK1 glutamate receptor, ionotropic, kainate 1 0.360133
TRNAU1AP tRNA selenocysteine 1 associated protein 1 0.356705
RANBP3 RAN binding protein 3 0.356324
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.351002
GDF7 growth differentiation factor 7 0.351002
KIRREL2 kin of IRRE like 2 (Drosophila) 0.34645
ZIC1 Zic family member 1 0.345314
KARS lysyl-tRNA synthetase 0.341529
SLC1A7 solute carrier family 1 (glutamate transporter), member 7 0.333979
UNC13B unc-13 homolog B (C. elegans) 0.330589
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.330213
GRIP1 glutamate receptor interacting protein 1 0.327581
PSAT1 phosphoserine aminotransferase 1 0.326453
TCHH trichohyalin 0.325327
FAAH fatty acid amide hydrolase 0.323825
POU3F4 POU class 3 homeobox 4 0.314465
NTM neurotrimin 0.312971
GABARAP GABA(A) receptor-associated protein 0.298826
NT5E 5'-nucleotidase, ecto (CD73) 0.294378
ATXN3 ataxin 3 0.289199
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 0.27998
CSAD cysteine sulfinic acid decarboxylase 0.277406
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 0.277406
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.275936
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 0.274101
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.264215
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.260566
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.260566
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.260202
CCND2 cyclin D2 0.260202
DPYSL5 dihydropyrimidinase-like 5 0.255107
CACNA1H calcium channel, voltage-dependent, T type, alpha 1H subunit 0.250751
DYNLRB1 dynein, light chain, roadblock-type 1 0.249664
COL14A1 collagen, type XIV, alpha 1 0.247492
CRHR1 corticotropin releasing hormone receptor 1 0.247492
TMSB10 thymosin beta 10 0.24424
SCN8A sodium channel, voltage gated, type VIII alpha subunit 0.243879
FMN1 formin 1 0.243519
NFIA nuclear factor I/A 0.238119
TJP1 tight junction protein 1 0.236324
BSN bassoon presynaptic cytomatrix protein 0.231672
FOXP2 forkhead box P2 0.225976
KLK8 kallikrein-related peptidase 8 0.22385
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.223497
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.223497
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.223143
CAMK4 calcium/calmodulin-dependent protein kinase IV 0.206766
MAP2 microtubule-associated protein 2 0.20574
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.1921
NR2C2 nuclear receptor subfamily 2, group C, member 2 0.188274
MYO5A myosin VA (heavy chain 12, myoxin) 0.183935
PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 0.182422
AFG3L2 AFG3-like AAA ATPase 2 0.177439
ADCY2 adenylate cyclase 2 (brain) 0.176587
SYT3 synaptotagmin III 0.175745
NCAM1 neural cell adhesion molecule 1 0.175466
INA internexin neuronal intermediate filament protein, alpha 0.174361
CRHR2 corticotropin releasing hormone receptor 2 0.167856
SYT4 synaptotagmin IV 0.166643
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) 0.164089
PAX2 paired box 2 0.162763
NPTXR neuronal pentraxin receptor 0.161275
GRM5 glutamate receptor, metabotropic 5 0.160658
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.160456
MEIS1 Meis homeobox 1 0.160456
SHANK1 SH3 and multiple ankyrin repeat domains 1 0.159658
GLUD1 glutamate dehydrogenase 1 0.157397
COX5A cytochrome c oxidase subunit Va 0.156688