organelle envelope lumen Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The region between the inner and outer lipid bilayers of an organelle envelope. (Gene Ontology, GO_0031970)
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Genes

176 proteins co-occuring with the organelle envelope lumen cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 2.31925
GFER growth factor, augmenter of liver regeneration 1.98835
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) 1.72182
TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast) 1.59952
TIMM10 translocase of inner mitochondrial membrane 10 homolog (yeast) 1.57932
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast) 1.51299
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 1.39239
COX17 COX17 cytochrome c oxidase copper chaperone 1.36307
HTRA2 HtrA serine peptidase 2 1.23452
ENDOG endonuclease G 1.22568
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) 1.19006
DIABLO diablo, IAP-binding mitochondrial protein 1.18697
HCCS holocytochrome c synthase 1.09035
BAX BCL2-associated X protein 1.08323
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.954483
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 0.911579
AK2 adenylate kinase 2 0.90089
CMC1 C-x(9)-C motif containing 1 0.842401
SUOX sulfite oxidase 0.823123
COA7 cytochrome c oxidase assembly factor 7 (putative) 0.814864
TIMM23B translocase of inner mitochondrial membrane 23 homolog B (yeast) 0.807982
SCO1 SCO1 cytochrome c oxidase assembly protein 0.806606
ADGRA1 adhesion G protein-coupled receptor A1 0.778669
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.766349
SOD2 superoxide dismutase 2, mitochondrial 0.764527
CLEC3A C-type lectin domain family 3, member A 0.746833
CLEC2B C-type lectin domain family 2, member B 0.73018
IMMT inner membrane protein, mitochondrial 0.729284
CLEC10A C-type lectin domain family 10, member A 0.724365
COX19 COX19 cytochrome c oxidase assembly factor 0.679413
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.660776
RC3H2 ring finger and CCCH-type domains 2 0.641001
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.609086
AK3 adenylate kinase 3 0.606128
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 0.589714
LACTB lactamase, beta 0.575912
SCO2 SCO2 cytochrome c oxidase assembly protein 0.571745
SAMM50 SAMM50 sorting and assembly machinery component 0.562187
COX11 COX11 cytochrome c oxidase copper chaperone 0.557629
AFP alpha-fetoprotein 0.534951
PSG3 pregnancy specific beta-1-glycoprotein 3 0.524704
HK1 hexokinase 1 0.522659
CD79A CD79a molecule, immunoglobulin-associated alpha 0.514085
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 0.494585
PARL presenilin associated, rhomboid-like 0.493371
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.472813
CFD complement factor D (adipsin) 0.465598
CEMIP cell migration inducing protein, hyaluronan binding 0.461998
TXN thioredoxin 0.461599
BCL2 B-cell CLL/lymphoma 2 0.459602
SNX33 sorting nexin 33 0.457606
BCL2L1 BCL2-like 1 0.456012
PRELID1 PRELI domain containing 1 0.445672
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.443292
TM7SF2 transmembrane 7 superfamily member 2 0.430647
APAF1 apoptotic peptidase activating factor 1 0.428678
LBR lamin B receptor 0.420036
PRDX5 peroxiredoxin 5 0.410259
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.407529
GLRX glutaredoxin (thioltransferase) 0.395098
CAST calpastatin 0.375818
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.37045
CYB5A cytochrome b5 type A (microsomal) 0.360896
CKMT2 creatine kinase, mitochondrial 2 (sarcomeric) 0.341529
DGKQ diacylglycerol kinase, theta 110kDa 0.338884
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.333979
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.333602
WIBG within bgcn homolog (Drosophila) 0.332848
CIAPIN1 cytokine induced apoptosis inhibitor 1 0.330589
SUGP1 SURP and G patch domain containing 1 0.329084
ZBTB7A zinc finger and BTB domain containing 7A 0.324576
DHFR dihydrofolate reductase 0.321201
EIF3G eukaryotic translation initiation factor 3, subunit G 0.304771
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.293267
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 0.291047
CPOX coproporphyrinogen oxidase 0.289569
PKLR pyruvate kinase, liver and RBC 0.281453
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.281085
DHCR7 7-dehydrocholesterol reductase 0.278141
TOR1A torsin family 1, member A (torsin A) 0.275202
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide 0.272633
SARDH sarcosine dehydrogenase 0.261296
NOX4 NADPH oxidase 4 0.256925
NLN neurolysin (metallopeptidase M3 family) 0.25438
BCOR BCL6 corepressor 0.250751
PKM pyruvate kinase, muscle 0.247854
G6PC glucose-6-phosphatase, catalytic subunit 0.236683
STAR steroidogenic acute regulatory protein 0.234174
SGK3 serum/glucocorticoid regulated kinase family, member 3 0.234174
SLC31A1 solute carrier family 31 (copper transporter), member 1 0.232744
ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 0.232386
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) 0.227752
PPIF peptidylprolyl isomerase F 0.227397
GLRX2 glutaredoxin 2 0.22279
TRIAP1 TP53 regulated inhibitor of apoptosis 1 0.218212
NOV nephroblastoma overexpressed 0.216111
BBS1 Bardet-Biedl syndrome 1 0.210549
NOXA1 NADPH oxidase activator 1 0.208825
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.208137
ACPP acid phosphatase, prostate 0.198991
OPA1 optic atrophy 1 (autosomal dominant) 0.195025
DGKA diacylglycerol kinase, alpha 80kDa 0.194371
CKM creatine kinase, muscle 0.190175
ACHE acetylcholinesterase (Yt blood group) 0.189539
HSPA4 heat shock 70kDa protein 4 0.180339
PRDX4 peroxiredoxin 4 0.179167
NOXO1 NADPH oxidase organizer 1 0.178588
NT5E 5'-nucleotidase, ecto (CD73) 0.172201
AFF2 AF4/FMR2 family, member 2 0.170629
MAP3K11 mitogen-activated protein kinase kinase kinase 11 0.169099
BCL2L11 BCL2-like 11 (apoptosis facilitator) 0.168598
EFNA2 ephrin-A2 0.167366
BAK1 BCL2-antagonist/killer 1 0.166167
DNAH8 dynein, axonemal, heavy chain 8 0.16342
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast) 0.159856
NMS neuromedin S 0.159268
NUMBL numb homolog (Drosophila)-like 0.12604
SRSF1 serine/arginine-rich splicing factor 1 0.125847
IGHV1-2 immunoglobulin heavy variable 1-2 0.125636
CYB5R3 cytochrome b5 reductase 3 0.125319
NOX1 NADPH oxidase 1 0.125268
SNX9 sorting nexin 9 0.124959
NLRP3 NLR family, pyrin domain containing 3 0.12489
GRPR gastrin-releasing peptide receptor 0.124481
LMNA lamin A/C 0.124317
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.124114
FTH1 ferritin, heavy polypeptide 1 0.123168
CTSE cathepsin E 0.122719
USP9X ubiquitin specific peptidase 9, X-linked 0.121972
ALPPL2 alkaline phosphatase, placental-like 2 0.121684
ALPL alkaline phosphatase, liver/bone/kidney 0.121639
ALPP alkaline phosphatase, placental 0.121617
EMD emerin 0.120875
SUN1 Sad1 and UNC84 domain containing 1 0.120875
ISG15 ISG15 ubiquitin-like modifier 0.120194
VCAM1 vascular cell adhesion molecule 1 0.119661
AKAP1 A kinase (PRKA) anchor protein 1 0.119661
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 0.119583
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.119321
GPR182 G protein-coupled receptor 182 0.119321
PREP prolyl endopeptidase 0.118892
NME1 NME/NM23 nucleoside diphosphate kinase 1 0.118809
ISG20 interferon stimulated exonuclease gene 20kDa 0.118644
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.118589
SRGN serglycin 0.118534
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.118252
LEMD3 LEM domain containing 3 0.118053
HAX1 HCLS1 associated protein X-1 0.117879
CAPN2 calpain 2, (m/II) large subunit 0.117468
SCN10A sodium channel, voltage gated, type X alpha subunit 0.117379
CYR61 cysteine-rich, angiogenic inducer, 61 0.117168
DAPK1 death-associated protein kinase 1 0.117137
FTL ferritin, light polypeptide 0.116738
CDSN corneodesmosin 0.11652
VDAC1 voltage-dependent anion channel 1 0.116361
PHYH phytanoyl-CoA 2-hydroxylase 0.116074
TG thyroglobulin 0.116042
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 0.115944
CLN3 ceroid-lipofuscinosis, neuronal 3 0.115911
GIF gastric intrinsic factor (vitamin B synthesis) 0.115878
CDC25A cell division cycle 25A 0.115845
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.115715
MT2A metallothionein 2A 0.11555
CTSB cathepsin B 0.115516
CKMT1A creatine kinase, mitochondrial 1A 0.11518
BCHE butyrylcholinesterase 0.114524
GNRHR gonadotropin-releasing hormone receptor 0.114453
TAZ tafazzin 0.114312
EPX eosinophil peroxidase 0.114207
SYNE1 spectrin repeat containing, nuclear envelope 1 0.114135
IL32 interleukin 32 0.11399
TPR translocated promoter region, nuclear basket protein 0.113773
THOP1 thimet oligopeptidase 1 0.113441
TXN2 thioredoxin 2 0.113256
ADRB1 adrenoceptor beta 1 0.113105
MPO myeloperoxidase 0.112915