omega speckle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs). (Gene Ontology, GO_0035062)
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Genes

10 proteins co-occuring with the omega speckle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 1.24445
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1.21894
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.909251
BIRC3 baculoviral IAP repeat containing 3 0.881477
ATXN1 ataxin 1 0.793771
LGALS4 lectin, galactoside-binding, soluble, 4 0.679849
SRSF2 serine/arginine-rich splicing factor 2 0.463598
HSPA4 heat shock 70kDa protein 4 0.350243
HTT huntingtin 0.349105
MAPK8 mitogen-activated protein kinase 8 0.191777