nuclear pore outer ring Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates). (Gene Ontology, GO_0031080)
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9 proteins localized to the nuclear pore outer ring cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NUP107 nucleoporin 107kDa 0.663342
NUP98 nucleoporin 98kDa 0.663342
SEH1L SEH1-like (S. cerevisiae) 0.663342
NUP160 nucleoporin 160kDa 0.663342
NUP85 nucleoporin 85kDa 0.663342
NUP43 nucleoporin 43kDa 0.663342
NUP133 nucleoporin 133kDa 0.663342
SEC13 SEC13 homolog (S. cerevisiae) 0.663342
NUP37 nucleoporin 37kDa 0.663342