nuclear inner membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope. (Gene Ontology, GO_0005637)
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118 proteins co-occuring with the nuclear inner membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
EMD emerin 2.74689
LBR lamin B receptor 2.49248
LEMD3 LEM domain containing 3 2.17933
LMNA lamin A/C 2.02493
SUN1 Sad1 and UNC84 domain containing 1 1.82592
LMNB1 lamin B1 1.74067
BANF1 barrier to autointegration factor 1 1.58391
SYNE1 spectrin repeat containing, nuclear envelope 1 1.42036
TM7SF2 transmembrane 7 superfamily member 2 1.35102
LMNB2 lamin B2 1.22984
NRM nurim (nuclear envelope membrane protein) 1.17414
AKAP8L A kinase (PRKA) anchor protein 8-like 1.1342
ERBB2IP erbb2 interacting protein 1.05993
MAN1C1 mannosidase, alpha, class 1C, member 1 1.04632
NUP153 nucleoporin 153kDa 0.899962
ANKLE1 ankyrin repeat and LEM domain containing 1 0.886089
ANKLE2 ankyrin repeat and LEM domain containing 2 0.863528
RNF13 ring finger protein 13 0.846532
KLRC3 killer cell lectin-like receptor subfamily C, member 3 0.821288
DPY19L3 dpy-19-like 3 (C. elegans) 0.774558
TPR translocated promoter region, nuclear basket protein 0.751357
NUP35 nucleoporin 35kDa 0.74322
GYPC glycophorin C (Gerbich blood group) 0.71857
TOR1AIP1 torsin A interacting protein 1 0.716346
UNC50 unc-50 homolog (C. elegans) 0.689451
LMO7 LIM domain 7 0.666827
FBXW10 F-box and WD repeat domain containing 10 0.636723
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.635013
TRIM27 tripartite motif containing 27 0.632024
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide 0.626057
PRR14 proline rich 14 0.617982
DHCR7 7-dehydrocholesterol reductase 0.615437
NDC1 NDC1 transmembrane nucleoporin 0.609932
SUN5 Sad1 and UNC84 domain containing 5 0.601487
NUP155 nucleoporin 155kDa 0.595173
ATL3 atlastin GTPase 3 0.591392
NUP107 nucleoporin 107kDa 0.553078
TRMT1 tRNA methyltransferase 1 homolog (S. cerevisiae) 0.545648
CDK1 cyclin-dependent kinase 1 0.538238
ARL6IP4 ADP-ribosylation factor-like 6 interacting protein 4 0.503506
ZMPSTE24 zinc metallopeptidase STE24 0.491752
PUS3 pseudouridylate synthase 3 0.469604
DPY19L2 dpy-19-like 2 (C. elegans) 0.449245
RNF43 ring finger protein 43 0.443689
ALOX5AP arachidonate 5-lipoxygenase-activating protein 0.443689
TMEM43 transmembrane protein 43 0.430647
DPF2 D4, zinc and double PHD fingers family 2 0.417294
VRK2 vaccinia related kinase 2 0.413773
ADAT2 adenosine deaminase, tRNA-specific 2 0.405971
LEFTY1 left-right determination factor 1 0.403637
CASP6 caspase 6, apoptosis-related cysteine peptidase 0.40247
SRPK2 SRSF protein kinase 2 0.397035
SUGP1 SURP and G patch domain containing 1 0.394323
SMAD2 SMAD family member 2 0.392001
PRKCA protein kinase C, alpha 0.380045
NUP160 nucleoporin 160kDa 0.369301
WIBG within bgcn homolog (Drosophila) 0.368536
PRKCD protein kinase C, delta 0.354802
NAT10 N-acetyltransferase 10 (GCN5-related) 0.346829
PFAS phosphoribosylformylglycinamidine synthase 0.338884
COIL coilin 0.334733
NONO non-POU domain containing, octamer-binding 0.332095
DES desmin 0.330966
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A 0.321201
LEFTY2 left-right determination factor 2 0.320451
NUP214 nucleoporin 214kDa 0.301054
EBNA1BP2 EBNA1 binding protein 2 0.292527
LRRC7 leucine rich repeat containing 7 0.28846
ULBP1 UL16 binding protein 1 0.284401
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 0.280349
TMPO thymopoietin 0.278141
EFTUD2 elongation factor Tu GTP binding domain containing 2 0.278141
NUMA1 nuclear mitotic apparatus protein 1 0.272267
SGK3 serum/glucocorticoid regulated kinase family, member 3 0.268237
KPNB1 karyopherin (importin) beta 1 0.263485
RCE1 Ras converting CAAX endopeptidase 1 0.26166
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7 0.259837
DTNB dystrobrevin, beta 0.259109
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2 0.257289
FOXH1 forkhead box H1 0.254017
YEATS4 YEATS domain containing 4 0.252564
PAX7 paired box 7 0.247492
CBX5 chromobox homolog 5 0.247492
NUP93 nucleoporin 93kDa 0.242437
PIAS2 protein inhibitor of activated STAT, 2 0.240996
CAV2 caveolin 2 0.238478
AKAP8 A kinase (PRKA) anchor protein 8 0.234533
CD38 CD38 molecule 0.224558
ICMT isoprenylcysteine carboxyl methyltransferase 0.222083
PCYT1A phosphate cytidylyltransferase 1, choline, alpha 0.219969
TBX3 T-box 3 0.21716
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.215761
UBE2G1 ubiquitin-conjugating enzyme E2G 1 0.214714
STAG3 stromal antigen 3 0.214366
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 0.198658
SRPK1 SRSF protein kinase 1 0.196999
HBEGF heparin-binding EGF-like growth factor 0.196669
GSTA3 glutathione S-transferase alpha 3 0.196339
GSTA4 glutathione S-transferase alpha 4 0.195025
GSTA2 glutathione S-transferase alpha 2 0.195025
GSTA1 glutathione S-transferase alpha 1 0.19307
PIAS3 protein inhibitor of activated STAT, 3 0.190495
MICB MHC class I polypeptide-related sequence B 0.189222
MYF5 myogenic factor 5 0.189222
LRPPRC leucine-rich pentatricopeptide repeat containing 0.187646
HDAC3 histone deacetylase 3 0.184853
DNAH8 dynein, axonemal, heavy chain 8 0.184547
SRSF1 serine/arginine-rich splicing factor 1 0.18093
HDLBP high density lipoprotein binding protein 0.179167
TRIM24 tripartite motif containing 24 0.168101
SMAD3 SMAD family member 3 0.167366
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.166884
DDB2 damage-specific DNA binding protein 2, 48kDa 0.161484
EGFR epidermal growth factor receptor 0.160658
HPD 4-hydroxyphenylpyruvate dioxygenase 0.160456
GFAP glial fibrillary acidic protein 0.159856
MKL1 megakaryoblastic leukemia (translocation) 1 0.159856
PIF1 PIF1 5'-to-3' DNA helicase 0.158502