nuclear envelope lumen Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide. (Gene Ontology, GO_0005641)
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80 proteins co-occuring with the nuclear envelope lumen cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ADGRA1 adhesion G protein-coupled receptor A1 1.03629
RC3H2 ring finger and CCCH-type domains 2 0.887474
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 0.831843
AFP alpha-fetoprotein 0.771363
PSG3 pregnancy specific beta-1-glycoprotein 3 0.759978
CD79A CD79a molecule, immunoglobulin-associated alpha 0.748189
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 0.726599
CEMIP cell migration inducing protein, hyaluronan binding 0.690764
SNX33 sorting nexin 33 0.685517
TM7SF2 transmembrane 7 superfamily member 2 0.656464
LBR lamin B receptor 0.644429
WIBG within bgcn homolog (Drosophila) 0.54936
SUGP1 SURP and G patch domain containing 1 0.544823
ZBTB7A zinc finger and BTB domain containing 7A 0.540294
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.492157
DHCR7 7-dehydrocholesterol reductase 0.488923
TOR1A torsin family 1, member A (torsin A) 0.486096
BCOR BCL6 corepressor 0.459203
SGK3 serum/glucocorticoid regulated kinase family, member 3 0.440916
ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 0.438937
CYB5A cytochrome b5 type A (microsomal) 0.430647
NOV nephroblastoma overexpressed 0.420428
NOXA1 NADPH oxidase activator 1 0.412601
ACPP acid phosphatase, prostate 0.401304
ACHE acetylcholinesterase (Yt blood group) 0.390068
PRDX4 peroxiredoxin 4 0.37697
NOXO1 NADPH oxidase organizer 1 0.375818
AFF2 AF4/FMR2 family, member 2 0.364713
EFNA2 ephrin-A2 0.359752
NMS neuromedin S 0.346071
NUMBL numb homolog (Drosophila)-like 0.333225
SRSF1 serine/arginine-rich splicing factor 1 0.328708
IGHV1-2 immunoglobulin heavy variable 1-2 0.323825
CYB5R3 cytochrome b5 reductase 3 0.316708
NOX1 NADPH oxidase 1 0.315586
SNX9 sorting nexin 9 0.308867
NLRP3 NLR family, pyrin domain containing 3 0.307377
GRPR gastrin-releasing peptide receptor 0.298826
LMNA lamin A/C 0.295489
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.291417
NOX4 NADPH oxidase 4 0.287721
FTH1 ferritin, heavy polypeptide 1 0.273367
CTSE cathepsin E 0.265311
DNAH8 dynein, axonemal, heavy chain 8 0.263485
G6PC glucose-6-phosphatase, catalytic subunit 0.252927
USP9X ubiquitin specific peptidase 9, X-linked 0.252564
ALPPL2 alkaline phosphatase, placental-like 2 0.247854
ALPL alkaline phosphatase, liver/bone/kidney 0.24713
ALPP alkaline phosphatase, placental 0.246769
NT5E 5'-nucleotidase, ecto (CD73) 0.242797
EMD emerin 0.235249
SUN1 Sad1 and UNC84 domain containing 1 0.235249
ISG15 ISG15 ubiquitin-like modifier 0.225267
AKAP1 A kinase (PRKA) anchor protein 1 0.217861
VCAM1 vascular cell adhesion molecule 1 0.217861
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 0.21681
GPR182 G protein-coupled receptor 182 0.213322
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 0.213322
PREP prolyl endopeptidase 0.207794
ISG20 interferon stimulated exonuclease gene 20kDa 0.204718
SRGN serglycin 0.203361
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.199993
LEMD3 LEM domain containing 3 0.197662
SCN10A sodium channel, voltage gated, type X alpha subunit 0.190175
CYR61 cysteine-rich, angiogenic inducer, 61 0.18796
FTL ferritin, light polypeptide 0.183631
PHYH phytanoyl-CoA 2-hydroxylase 0.177439
TG thyroglobulin 0.177154
CLN3 ceroid-lipofuscinosis, neuronal 3 0.176024
GIF gastric intrinsic factor (vitamin B synthesis) 0.175745
CDC25A cell division cycle 25A 0.175466
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.174361
CTSB cathepsin B 0.172735
BCHE butyrylcholinesterase 0.165463
GNRHR gonadotropin-releasing hormone receptor 0.165
EPX eosinophil peroxidase 0.16342
SYNE1 spectrin repeat containing, nuclear envelope 1 0.16298
TPR translocated promoter region, nuclear basket protein 0.160863
ADRB1 adrenoceptor beta 1 0.157397
MPO myeloperoxidase 0.156513