nuclear chromosome part Gene Set

Dataset GO Cellular Component Annotations
Category structural or functional annotations
Type cellular component
Description Any constituent part of a nuclear chromosome, a chromosome found in the nucleus of a eukaryotic cell. (Gene Ontology, GO_0044454)
External Link http://amigo.geneontology.org/amigo/term/GO:0044454
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Genes

350 proteins localized to the nuclear chromosome part cellular component from the curated GO Cellular Component Annotations dataset.

Symbol Name
ACD adrenocortical dysplasia homolog (mouse)
ACTB actin, beta
ACTL6A actin-like 6A
ACTR5 ARP5 actin-related protein 5 homolog (yeast)
ACTR8 ARP8 actin-related protein 8 homolog (yeast)
ALKBH1 alkB, alkylation repair homolog 1 (E. coli)
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
APTX aprataxin
AR androgen receptor
ARID1A AT rich interactive domain 1A (SWI-like)
ASF1A anti-silencing function 1A histone chaperone
ASF1B anti-silencing function 1B histone chaperone
ASXL1 additional sex combs like transcriptional regulator 1
ASXL2 additional sex combs like transcriptional regulator 2
ATRX alpha thalassemia/mental retardation syndrome X-linked
AURKA aurora kinase A
AURKB aurora kinase B
AURKC aurora kinase C
BAZ1B bromodomain adjacent to zinc finger domain, 1B
BCAS2 breast carcinoma amplified sequence 2
BLM Bloom syndrome, RecQ helicase-like
BRD4 bromodomain containing 4
BRD8 bromodomain containing 8
BRMS1 breast cancer metastasis suppressor 1
BRMS1L breast cancer metastasis-suppressor 1-like
BUB1 BUB1 mitotic checkpoint serine/threonine kinase
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B
CALCOCO1 calcium binding and coiled-coil domain 1
CBX1 chromobox homolog 1
CBX3 chromobox homolog 3
CBX5 chromobox homolog 5
CBX7 chromobox homolog 7
CBX8 chromobox homolog 8
CCAR2 cell cycle and apoptosis regulator 2
CCDC155 coiled-coil domain containing 155
CCNB1 cyclin B1
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
CDC45 cell division cycle 45
CDC5L cell division cycle 5-like
CDCA5 cell division cycle associated 5
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CECR2 cat eye syndrome chromosome region, candidate 2
CENPA centromere protein A
CENPC centromere protein C
CENPE centromere protein E, 312kDa
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHD4 chromodomain helicase DNA binding protein 4
CHRAC1 chromatin accessibility complex 1
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CREB1 cAMP responsive element binding protein 1
CREBBP CREB binding protein
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CTC1 CTS telomere maintenance complex component 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
DBF4B DBF4 zinc finger B
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DFFB DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)
DLX5 distal-less homeobox 5
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPF2 D4, zinc and double PHD fingers family 2
EED embryonic ectoderm development
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EME1 essential meiotic structure-specific endonuclease 1
ENC1 ectodermal-neural cortex 1 (with BTB domain)
EP400 E1A binding protein p400
ERCC1 excision repair cross-complementation group 1
ERCC4 excision repair cross-complementation group 4
ERCC5 excision repair cross-complementation group 5
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAM60A family with sequence similarity 60, member A
FER fer (fps/fes related) tyrosine kinase
FKBP6 FK506 binding protein 6, 36kDa
FOXC1 forkhead box C1
FOXD3 forkhead box D3
FOXH1 forkhead box H1
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GATA3 GATA binding protein 3
GATA4 GATA binding protein 4
GATAD2B GATA zinc finger domain containing 2B
H1F0 H1 histone family, member 0
H1FNT H1 histone family, member N, testis-specific
H2AFB1 H2A histone family, member B1
H2AFX H2A histone family, member X
H2AFY H2A histone family, member Y
H2AFY2 H2A histone family, member Y2
H2AFZ H2A histone family, member Z
H2BFM H2B histone family, member M
H2BFWT H2B histone family, member W, testis-specific
H3F3C H3 histone, family 3C
HAND2 heart and neural crest derivatives expressed 2
HAT1 histone acetyltransferase 1
HDAC1 histone deacetylase 1
HDAC2 histone deacetylase 2
HELB helicase (DNA) B
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HIRA histone cell cycle regulator
HIST1H1A histone cluster 1, H1a
HIST1H1B histone cluster 1, H1b
HIST1H1C histone cluster 1, H1c
HIST1H1D histone cluster 1, H1d
HIST1H1E histone cluster 1, H1e
HIST1H2BA histone cluster 1, H2ba
HIST1H2BB histone cluster 1, H2bb
HIST1H2BD histone cluster 1, H2bd
HIST1H2BH histone cluster 1, H2bh
HIST1H2BJ histone cluster 1, H2bj
HIST1H2BK histone cluster 1, H2bk
HIST1H2BL histone cluster 1, H2bl
HIST1H2BM histone cluster 1, H2bm
HIST1H2BN histone cluster 1, H2bn
HIST1H2BO histone cluster 1, H2bo
HIST2H2BE histone cluster 2, H2be
HIST2H2BF histone cluster 2, H2bf
HIST3H2A histone cluster 3, H2a
HIST3H2BB histone cluster 3, H2bb
HIST3H3 histone cluster 3, H3
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPK heterogeneous nuclear ribonucleoprotein K
HSPA2 heat shock 70kDa protein 2
HUS1 HUS1 checkpoint homolog (S. pombe)
HUS1B HUS1 checkpoint homolog b (S. pombe)
INCENP inner centromere protein antigens 135/155kDa
ING2 inhibitor of growth family, member 2
ING3 inhibitor of growth family, member 3
INO80 INO80 complex subunit
INO80B INO80 complex subunit B
INO80C INO80 complex subunit C
INO80E INO80 complex subunit E
IPO4 importin 4
IRF1 interferon regulatory factor 1
IRF4 interferon regulatory factor 4
JUN jun proto-oncogene
JUNB jun B proto-oncogene
JUND jun D proto-oncogene
KAT5 K(lysine) acetyltransferase 5
KDM1A lysine (K)-specific demethylase 1A
KDM2A lysine (K)-specific demethylase 2A
KDM4C lysine (K)-specific demethylase 4C
KLF1 Kruppel-like factor 1 (erythroid)
KLF4 Kruppel-like factor 4 (gut)
KLHDC3 kelch domain containing 3
LDB1 LIM domain binding 1
LIG3 ligase III, DNA, ATP-dependent
LRWD1 leucine-rich repeats and WD repeat domain containing 1
MBD2 methyl-CpG binding domain protein 2
MBD3 methyl-CpG binding domain protein 3
MCM2 minichromosome maintenance complex component 2
MCM3 minichromosome maintenance complex component 3
MCRS1 microspherule protein 1
MEF2A myocyte enhancer factor 2A
MEI4 meiosis-specific 4 homolog (S. cerevisiae)
MIXL1 Mix paired-like homeobox
MLH1 mutL homolog 1
MLH3 mutL homolog 3
MMS22L MMS22-like, DNA repair protein
MORF4L1 mortality factor 4 like 1
MPHOSPH8 M-phase phosphoprotein 8
MSH4 mutS homolog 4
MSH5 mutS homolog 5
MSH6 mutS homolog 6
MTA2 metastasis associated 1 family, member 2
MUC1 mucin 1, cell surface associated
MYOD1 myogenic differentiation 1
NACC2 NACC family member 2, BEN and BTB (POZ) domain containing
NASP nuclear autoantigenic sperm protein (histone-binding)
NBN nibrin
NCAPD3 non-SMC condensin II complex, subunit D3
NCOA1 nuclear receptor coactivator 1
NCOR1 nuclear receptor corepressor 1
NDC80 NDC80 kinetochore complex component
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFRKB nuclear factor related to kappaB binding protein
NPM2 nucleophosmin/nucleoplasmin 2
NR1D1 nuclear receptor subfamily 1, group D, member 1
NR1H3 nuclear receptor subfamily 1, group H, member 3
NR1H4 nuclear receptor subfamily 1, group H, member 4
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
OBFC1 oligonucleotide/oligosaccharide-binding fold containing 1
ORC1 origin recognition complex, subunit 1
ORC2 origin recognition complex, subunit 2
ORC3 origin recognition complex, subunit 3
ORC4 origin recognition complex, subunit 4
ORC5 origin recognition complex, subunit 5
ORC6 origin recognition complex, subunit 6
P3H4 prolyl 3-hydroxylase family member 4 (non-enzymatic)
PAX6 paired box 6
PCGF2 polycomb group ring finger 2
PCNA proliferating cell nuclear antigen
PHC1 polyhomeotic homolog 1 (Drosophila)
PHF12 PHD finger protein 12
PHOX2A paired-like homeobox 2a
PHOX2B paired-like homeobox 2b
PIF1 PIF1 5'-to-3' DNA helicase
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLK1 polo-like kinase 1
PLRG1 pleiotropic regulator 1
POGZ pogo transposable element with ZNF domain
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit
POLA2 polymerase (DNA directed), alpha 2, accessory subunit
POLD1 polymerase (DNA directed), delta 1, catalytic subunit
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
POLE polymerase (DNA directed), epsilon, catalytic subunit
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit
POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD)
POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like
POT1 protection of telomeres 1
POU4F1 POU class 4 homeobox 1
PRDX1 peroxiredoxin 1
PRPF19 pre-mRNA processing factor 19
PURA purine-rich element binding protein A
PURB purine-rich element binding protein B
PUS1 pseudouridylate synthase 1
RAD1 RAD1 checkpoint DNA exonuclease
RAD21 RAD21 homolog (S. pombe)
RAD21L1 RAD21-like 1 (S. pombe)
RAD50 RAD50 homolog (S. cerevisiae)
RAD51 RAD51 recombinase
RAD9A RAD9 homolog A (S. pombe)
RAD9B RAD9 homolog B (S. pombe)
RARA retinoic acid receptor, alpha
RARG retinoic acid receptor, gamma
RBBP4 retinoblastoma binding protein 4
RBMX RNA binding motif protein, X-linked
RCC1 regulator of chromosome condensation 1
REC8 REC8 meiotic recombination protein
REPIN1 replication initiator 1
RFX3 regulatory factor X, 3 (influences HLA class II expression)
RING1 ring finger protein 1
RNF2 ring finger protein 2
RNF212 ring finger protein 212
RPA1 replication protein A1, 70kDa
RPA2 replication protein A2, 32kDa
RPA3 replication protein A3, 14kDa
RPA4 replication protein A4, 30kDa
RUNX2 runt-related transcription factor 2
RUNX3 runt-related transcription factor 3
RUVBL1 RuvB-like AAA ATPase 1
RUVBL2 RuvB-like AAA ATPase 2
RXRA retinoid X receptor, alpha
SATB1 SATB homeobox 1
SCRT2 scratch family zinc finger 2
SETD3 SET domain containing 3
SETDB1 SET domain, bifurcated 1
SFR1 SWI5-dependent recombination repair 1
SGOL1 shugoshin-like 1 (S. pombe)
SIN3A SIN3 transcription regulator family member A
SIN3B SIN3 transcription regulator family member B
SIRT1 sirtuin 1
SIRT2 sirtuin 2
SIRT6 sirtuin 6
SIRT7 sirtuin 7
SLX4 SLX4 structure-specific endonuclease subunit
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMAD4 SMAD family member 4
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SMC1B structural maintenance of chromosomes 1B
SMC3 structural maintenance of chromosomes 3
SNAI2 snail family zinc finger 2
SOX18 SRY (sex determining region Y)-box 18
SPI1 Spi-1 proto-oncogene
SRF serum response factor (c-fos serum response element-binding transcription factor)
SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1
STAG3 stromal antigen 3
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUN2 Sad1 and UNC84 domain containing 2
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila)
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila)
SUV420H2 suppressor of variegation 4-20 homolog 2 (Drosophila)
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SWI5 SWI5 recombination repair homolog (yeast)
SYCE1 synaptonemal complex central element protein 1
SYCE1L synaptonemal complex central element protein 1-like
SYCE2 synaptonemal complex central element protein 2
SYCE3 synaptonemal complex central element protein 3
SYCP1 synaptonemal complex protein 1
SYCP2 synaptonemal complex protein 2
T T, brachyury homolog (mouse)
TAL1 T-cell acute lymphocytic leukemia 1
TARDBP TAR DNA binding protein
TBP TATA box binding protein
TCF12 transcription factor 12
TCF3 transcription factor 3
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TCP1 t-complex 1
TEN1 TEN1 CST complex subunit
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TERF2 telomeric repeat binding factor 2
TERF2IP telomeric repeat binding factor 2, interacting protein
TERT telomerase reverse transcriptase
TEX11 testis expressed 11
TEX12 testis expressed 12
TFPT TCF3 (E2A) fusion partner (in childhood Leukemia)
THRB thyroid hormone receptor, beta
TIMELESS timeless circadian clock
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TIPIN TIMELESS interacting protein
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
TONSL tonsoku-like, DNA repair protein
TOP1 topoisomerase (DNA) I
TOP1MT topoisomerase (DNA) I, mitochondrial
TP53 tumor protein p53
TP63 tumor protein p63
TRIM24 tripartite motif containing 24
TRIM28 tripartite motif containing 28
TRNP1 TMF1-regulated nuclear protein 1
TRRAP transformation/transcription domain-associated protein
TTC21B tetratricopeptide repeat domain 21B
UBE2A ubiquitin-conjugating enzyme E2A
UBE2B ubiquitin-conjugating enzyme E2B
UBE2I ubiquitin-conjugating enzyme E2I
UBE2U ubiquitin-conjugating enzyme E2U (putative)
UCHL5 ubiquitin carboxyl-terminal hydrolase L5
UHRF1 ubiquitin-like with PHD and ring finger domains 1
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
USP3 ubiquitin specific peptidase 3
WAPAL wings apart-like homolog (Drosophila)
WBP2 WW domain binding protein 2
XPA xeroderma pigmentosum, complementation group A
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YY1 YY1 transcription factor
ZFP57 ZFP57 zinc finger protein
ZMIZ2 zinc finger, MIZ-type containing 2
ZNF385A zinc finger protein 385A
ZNHIT1 zinc finger, HIT-type containing 1
ZRANB3 zinc finger, RAN-binding domain containing 3
ZSCAN4 zinc finger and SCAN domain containing 4