nuclear chromosome, telomeric region Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins. (Gene Ontology, GO_0000784)
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84 proteins co-occuring with the nuclear chromosome, telomeric region cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TINF2 TERF1 (TRF1)-interacting nuclear factor 2 2.87169
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 2.76149
POT1 protection of telomeres 1 2.69035
CTC1 CTS telomere maintenance complex component 1 1.79574
TERF2 telomeric repeat binding factor 2 1.53783
NOP10 NOP10 ribonucleoprotein 1.50057
TERT telomerase reverse transcriptase 1.49097
DKC1 dyskeratosis congenita 1, dyskerin 1.47004
ATM ATM serine/threonine kinase 1.44629
NHP2 NHP2 ribonucleoprotein 1.38017
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 1.15979
ACD adrenocortical dysplasia homolog (mouse) 1.06853
USB1 U6 snRNA biogenesis 1 1.003
RTEL1 regulator of telomere elongation helicase 1 0.997104
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.977589
TP53BP1 tumor protein p53 binding protein 1 0.952096
C9ORF78 chromosome 9 open reading frame 78 0.918111
RAD50 RAD50 homolog (S. cerevisiae) 0.90321
ZNF827 zinc finger protein 827 0.867206
MTRF1 mitochondrial translational release factor 1 0.855257
EXO1 exonuclease 1 0.840564
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.804772
ZSCAN4 zinc finger and SCAN domain containing 4 0.729284
H2AFX H2A histone family, member X 0.71768
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1 0.711908
CGGBP1 CGG triplet repeat binding protein 1 0.690764
TERF2IP telomeric repeat binding factor 2, interacting protein 0.685954
TRIP6 thyroid hormone receptor interactor 6 0.668992
STAG1 stromal antigen 1 0.6638
SLX4 SLX4 structure-specific endonuclease subunit 0.642286
CHEK1 checkpoint kinase 1 0.623504
ATR ATR serine/threonine kinase 0.619255
HMBOX1 homeobox containing 1 0.613742
RECQL4 RecQ protein-like 4 0.589714
RLIM ring finger protein, LIM domain interacting 0.575912
NBN nibrin 0.573411
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 0.572578
LPP LIM domain containing preferred translocation partner in lipoma 0.54194
ZC3H12D zinc finger CCCH-type containing 12D 0.538649
SMG6 SMG6 nonsense mediated mRNA decay factor 0.512455
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.509197
USP22 ubiquitin specific peptidase 22 0.499447
DDX39A DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A 0.485693
LRWD1 leucine-rich repeats and WD repeat domain containing 1 0.477636
OBFC1 oligonucleotide/oligosaccharide-binding fold containing 1 0.446069
TP53 tumor protein p53 0.437751
FRMD6 FERM domain containing 6 0.427891
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.409089
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 0.396648
TPSG1 tryptase gamma 1 0.395873
IGH immunoglobulin heavy locus 0.393549
SMN1 survival of motor neuron 1, telomeric 0.393549
RAD54B RAD54 homolog B (S. cerevisiae) 0.388909
COPS2 COP9 signalosome subunit 2 0.382354
MRI1 methylthioribose-1-phosphate isomerase 1 0.375818
PARK2 parkin RBR E3 ubiquitin protein ligase 0.373899
BOLL boule-like RNA-binding protein 0.371982
SIAH2 siah E3 ubiquitin protein ligase 2 0.371216
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.36204
SNW1 SNW domain containing 1 0.337751
RECQL RecQ helicase-like 0.334733
SMN2 survival of motor neuron 2, centromeric 0.302912
WRN Werner syndrome, RecQ helicase-like 0.273
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.265677
LIG4 ligase IV, DNA, ATP-dependent 0.26312
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.262025
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 0.253653
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 0.241356
TFR2 transferrin receptor 2 0.240636
PIF1 PIF1 5'-to-3' DNA helicase 0.237401
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.226686
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa 0.224558
MCM6 minichromosome maintenance complex component 6 0.223143
TIMELESS timeless circadian clock 0.218212
SIAH1 siah E3 ubiquitin protein ligase 1 0.208825
BRCA1 breast cancer 1, early onset 0.207108
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 0.206423
MYB v-myb avian myeloblastosis viral oncogene homolog 0.196339
TPP1 tripeptidyl peptidase I 0.181823
RAD17 RAD17 homolog (S. pombe) 0.179752
ATRIP ATR interacting protein 0.179167
SUN1 Sad1 and UNC84 domain containing 1 0.171149
PARP1 poly (ADP-ribose) polymerase 1 0.170114
DNA2 DNA replication helicase/nuclease 2 0.164089