mouth neoplasm Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A tumor (abnormal growth of tissue) of the mouth. (Human Phenotype Ontology, HP_0012290)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0012290
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Genes

70 genes associated with the mouth neoplasm phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
SND1 staphylococcal nuclease and tudor domain containing 1 0.845725
GRIK2 glutamate receptor, ionotropic, kainate 2 0.811465
PPP4R1L protein phosphatase 4, regulatory subunit 1-like (pseudogene) 0.716836
ETV6 ets variant 6 0.710458
PTPRJ protein tyrosine phosphatase, receptor type, J 0.703184
ANKRD17 ankyrin repeat domain 17 0.684849
NFIB nuclear factor I/B 0.678437
ACOXL acyl-CoA oxidase-like 0.654304
DFNA5 deafness, autosomal dominant 5 0.622665
LNX1 ligand of numb-protein X 1, E3 ubiquitin protein ligase 0.589794
PPIH peptidylprolyl isomerase H (cyclophilin H) 0.57928
TRAM2 translocation associated membrane protein 2 0.579165
ZNF395 zinc finger protein 395 0.572823
JAG1 jagged 1 0.560064
CCDC3 coiled-coil domain containing 3 0.558007
KDM1A lysine (K)-specific demethylase 1A 0.54245
DCC DCC netrin 1 receptor 0.536325
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 0.532978
WWOX WW domain containing oxidoreductase 0.530172
MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B 0.52536
SIM1 single-minded family bHLH transcription factor 1 0.52536
NELL1 NEL-like 1 (chicken) 0.521292
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.520736
FHIT fragile histidine triad 0.509391
SYK spleen tyrosine kinase 0.509391
SASH1 SAM and SH3 domain containing 1 0.507568
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.507122
CNTNAP2 contactin associated protein-like 2 0.503898
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 0.50044
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.498995
MMP2 matrix metallopeptidase 2 0.491594
SOX5 SRY (sex determining region Y)-box 5 0.48718
OPCML opioid binding protein/cell adhesion molecule-like 0.485813
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.484264
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 0.4774
SAMD4A sterile alpha motif domain containing 4A 0.4774
ATRNL1 attractin-like 1 0.4771
AQR aquarius intron-binding spliceosomal factor 0.4771
GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 0.4771
FGF14 fibroblast growth factor 14 0.476951
CNTN4 contactin 4 0.465095
ZBTB46 zinc finger and BTB domain containing 46 0.464302
POLE polymerase (DNA directed), epsilon, catalytic subunit 0.463779
STRN4 striatin, calmodulin binding protein 4 0.462746
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 0.461356
EIF3L eukaryotic translation initiation factor 3, subunit L 0.453708
ITSN1 intersectin 1 (SH3 domain protein) 0.451933
HS6ST3 heparan sulfate 6-O-sulfotransferase 3 0.450957
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.449998
SLC36A4 solute carrier family 36 (proton/amino acid symporter), member 4 0.449367
IRAK3 interleukin-1 receptor-associated kinase 3 0.44833
USP47 ubiquitin specific peptidase 47 0.44641
BCR breakpoint cluster region 0.444551
LOC643406 uncharacterized LOC643406 0.443691
SORCS3 sortilin-related VPS10 domain containing receptor 3 0.440913
PCSK5 proprotein convertase subtilisin/kexin type 5 0.440373
COL25A1 collagen, type XXV, alpha 1 0.437396
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated) 0.437249
GRIK4 glutamate receptor, ionotropic, kainate 4 0.435022
GPC5 glypican 5 0.434603
ASIC2 acid sensing (proton gated) ion channel 2 0.433636
CAMK4 calcium/calmodulin-dependent protein kinase IV 0.43316
PTPRG protein tyrosine phosphatase, receptor type, G 0.431956
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.430139
CRYL1 crystallin, lambda 1 0.428633
FTO fat mass and obesity associated 0.428448
NPAS3 neuronal PAS domain protein 3 0.427472
RPTOR regulatory associated protein of MTOR, complex 1 0.427111
DOCK1 dedicator of cytokinesis 1 0.425272
TSPEAR thrombospondin-type laminin G domain and EAR repeats 0.424807