midbody Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis. (Gene Ontology, GO_0030496)
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Genes

261 proteins co-occuring with the midbody cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
KIF23 kinesin family member 23 1.91048
AURKB aurora kinase B 1.89801
CEP55 centrosomal protein 55kDa 1.89316
PLK1 polo-like kinase 1 1.65513
KLHDC8B kelch domain containing 8B 1.51864
INCENP inner centromere protein antigens 135/155kDa 1.48588
ECT2 epithelial cell transforming 2 1.34665
RACGAP1 Rac GTPase activating protein 1 1.31843
TEX14 testis expressed 14 1.2889
ANLN anillin, actin binding protein 1.28783
KIF14 kinesin family member 14 1.25601
KIF20A kinesin family member 20A 1.19623
CEP126 centrosomal protein 126kDa 1.15364
BIRC5 baculoviral IAP repeat containing 5 1.05438
MITD1 MIT, microtubule interacting and transport, domain containing 1 1.0253
AURKC aurora kinase C 1.02131
CCP110 centriolar coiled coil protein 110kDa 1.01436
TUBA1A tubulin, alpha 1a 1.0109
CCSER1 coiled-coil serine-rich protein 1 0.976135
CNTLN centlein, centrosomal protein 0.962627
CENPE centromere protein E, 312kDa 0.952573
CDK1 cyclin-dependent kinase 1 0.943533
PLK3 polo-like kinase 3 0.922322
PRC1 protein regulator of cytokinesis 1 0.920449
OR2A4 olfactory receptor, family 2, subfamily A, member 4 0.919982
KIF20B kinesin family member 20B 0.913909
FBXL2 F-box and leucine-rich repeat protein 2 0.903673
PKP4 plakophilin 4 0.877791
CGGBP1 CGG triplet repeat binding protein 1 0.843778
CCDC124 coiled-coil domain containing 124 0.842859
CHMP4C charged multivesicular body protein 4C 0.837351
KIF4A kinesin family member 4A 0.824041
SEPT1 septin 1 0.808441
TSG101 tumor susceptibility 101 0.791022
PLK2 polo-like kinase 2 0.784614
DCDC5 doublecortin domain containing 5 0.775471
MOB1A MOB kinase activator 1A 0.772275
ARF6 ADP-ribosylation factor 6 0.764982
CDCA8 cell division cycle associated 8 0.761797
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 0.746833
ZFYVE19 zinc finger, FYVE domain containing 19 0.745025
MARK4 MAP/microtubule affinity-regulating kinase 4 0.744122
C6ORF89 chromosome 6 open reading frame 89 0.741867
RIC8A RIC8 guanine nucleotide exchange factor A 0.728389
SECISBP2L SECIS binding protein 2-like 0.716346
MAP4 microtubule-associated protein 4 0.697784
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) 0.697344
CSPP1 centrosome and spindle pole associated protein 1 0.690764
RASGEF1B RasGEF domain family, member 1B 0.684644
VAMP8 vesicle-associated membrane protein 8 0.679413
ZFYVE26 zinc finger, FYVE domain containing 26 0.65905
BRCA2 breast cancer 2, early onset 0.655172
STK31 serine/threonine kinase 31 0.64915
ARHGAP1 Rho GTPase activating protein 1 0.646574
KRT4 keratin 4, type II 0.644001
TACC1 transforming, acidic coiled-coil containing protein 1 0.629039
SEPT5 septin 5 0.62393
TBCD tubulin folding cofactor D 0.622229
EVI5 ecotropic viral integration site 5 0.622229
NUDC nudC nuclear distribution protein 0.621379
EFHC1 EF-hand domain (C-terminal) containing 1 0.612895
ZBTB33 zinc finger and BTB domain containing 33 0.612895
PCNT pericentrin 0.608241
SDCCAG3 serologically defined colon cancer antigen 3 0.607818
YPEL5 yippee-like 5 (Drosophila) 0.60444
KLHL2 kelch-like family member 2 0.59896
NEK7 NIMA-related kinase 7 0.591392
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) 0.590133
CHMP4A charged multivesicular body protein 4A 0.585523
RAB11FIP3 RAB11 family interacting protein 3 (class II) 0.583849
KLHL13 kelch-like family member 13 0.580504
KLHL9 kelch-like family member 9 0.575078
RAB3IP RAB3A interacting protein 0.574662
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.573411
NUMA1 nuclear mitotic apparatus protein 1 0.572578
H3F3B H3 histone, family 3B (H3.3B) 0.569664
H3F3A H3 histone, family 3A 0.569664
YIF1B Yip1 interacting factor homolog B (S. cerevisiae) 0.568001
SPAST spastin 0.566338
NUDCD3 NudC domain containing 3 0.565923
ALKBH4 alkB, alkylation repair homolog 4 (E. coli) 0.560114
TTLL12 tubulin tyrosine ligase-like family member 12 0.560114
MPLKIP M-phase specific PLK1 interacting protein 0.5597
CCNB1 cyclin B1 0.553491
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 0.553491
CENPF centromere protein F, 350/400kDa 0.551425
PSG8 pregnancy specific beta-1-glycoprotein 8 0.547297
FBXL5 F-box and leucine-rich repeat protein 5 0.53906
STARD9 StAR-related lipid transfer (START) domain containing 9 0.535772
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 0.527569
MOB1B MOB kinase activator 1B 0.52675
GAS2L3 growth arrest-specific 2 like 3 0.524704
NAT14 N-acetyltransferase 14 (GCN5-related, putative) 0.524294
SEPT9 septin 9 0.52225
STX2 syntaxin 2 0.510418
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.510418
NEK9 NIMA-related kinase 9 0.506757
KIF2C kinesin family member 2C 0.502288
NEK6 NIMA-related kinase 6 0.501881
KIF15 kinesin family member 15 0.501476
KIF12 kinesin family member 12 0.50107
SNAPC2 small nuclear RNA activating complex, polypeptide 2, 45kDa 0.4958
CHMP5 charged multivesicular body protein 5 0.493371
WDFY3 WD repeat and FYVE domain containing 3 0.491348
CRMP1 collapsin response mediator protein 1 0.490135
CHMP4B charged multivesicular body protein 4B 0.4865
ANAPC13 anaphase promoting complex subunit 13 0.484483
CHMP1A charged multivesicular body protein 1A 0.478038
ATXN10 ataxin 10 0.47442
TBCCD1 TBCC domain containing 1 0.47442
DLG1 discs, large homolog 1 (Drosophila) 0.473617
KATNB1 katanin p80 (WD repeat containing) subunit B 1 0.461599
EXOC4 exocyst complex component 4 0.446465
KIFC1 kinesin family member C1 0.445275
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 0.439333
KIF2B kinesin family member 2B 0.434985
MIR100 microRNA 100 0.433407
TEKT1 tektin 1 0.430647
CDC25C cell division cycle 25C 0.425924
GPC2 glypican 2 0.424745
MID1 midline 1 0.424353
GPSM2 G-protein signaling modulator 2 0.421604
MAP2 microtubule-associated protein 2 0.419252
KIF3B kinesin family member 3B 0.414164
TPX2 TPX2, microtubule-associated 0.41221
MAPT microtubule-associated protein tau 0.40675
NBR1 neighbor of BRCA1 gene 1 0.405193
SEPT2 septin 2 0.404026
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 0.399363
TTC19 tetratricopeptide repeat domain 19 0.399363
CHMP3 charged multivesicular body protein 3 0.397811
RCC2 regulator of chromosome condensation 2 0.396648
STX16 syntaxin 16 0.395485
CD2AP CD2-associated protein 0.391228
FIGN fidgetin 0.388909
CDK11A cyclin-dependent kinase 11A 0.388137
TOM1L2 target of myb1-like 2 (chicken) 0.386593
RANBP10 RAN binding protein 10 0.384665
LZTS2 leucine zipper, putative tumor suppressor 2 0.380429
SNX18 sorting nexin 18 0.37505
UVRAG UV radiation resistance associated 0.373516
TRIP13 thyroid hormone receptor interactor 13 0.368536
TEKT2 tektin 2 (testicular) 0.365095
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.361659
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.361277
SQSTM1 sequestosome 1 0.35899
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.355944
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) 0.354802
MIF4GD MIF4G domain containing 0.347208
PLK4 polo-like kinase 4 0.344178
DIAPH3 diaphanous-related formin 3 0.336996
TOM1L1 target of myb1 (chicken)-like 1 0.336241
SEPT12 septin 12 0.333602
PKN2 protein kinase N2 0.331719
GIPC1 GIPC PDZ domain containing family, member 1 0.331342
NCOA4 nuclear receptor coactivator 4 0.327581
KIF13A kinesin family member 13A 0.326453
NUP153 nucleoporin 153kDa 0.314839
SSNA1 Sjogren syndrome nuclear autoantigen 1 0.313718
NINL ninein-like 0.311851
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.30626
BRS3 bombesin-like receptor 3 0.305888
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.304399
EMD emerin 0.301425
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.300311
ITGB1BP1 integrin beta 1 binding protein 1 0.299197
CTBS chitobiase, di-N-acetyl- 0.29586
RAB24 RAB24, member RAS oncogene family 0.292527
NUP50P1 nucleoporin 50 pseudogene 1 0.292157
CEP57 centrosomal protein 57kDa 0.291787
FBXO7 F-box protein 7 0.291787
CHMP2A charged multivesicular body protein 2A 0.290678
ANAPC10 anaphase promoting complex subunit 10 0.28846
CENPB centromere protein B, 80kDa 0.287352
PRKD3 protein kinase D3 0.282558
TADA2A transcriptional adaptor 2A 0.278877
CDKN2A cyclin-dependent kinase inhibitor 2A 0.277774
KIF13B kinesin family member 13B 0.275569
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y 0.274101
MNX1 motor neuron and pancreas homeobox 1 0.2708
SH3PXD2A SH3 and PX domains 2A 0.270068
ETV1 ets variant 1 0.269335
GPSM1 G-protein signaling modulator 1 0.268969
KIAA0226 KIAA0226 0.268237
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.257652
NEK2 NIMA-related kinase 2 0.257289
NAT10 N-acetyltransferase 10 (GCN5-related) 0.256925
FZD1 frizzled class receptor 1 0.254743
CDC20 cell division cycle 20 0.253291
LIMA1 LIM domain and actin binding 1 0.251476
BRCA1 breast cancer 1, early onset 0.24713
CENPU centromere protein U 0.24713
BMP5 bone morphogenetic protein 5 0.246769
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.246046
RASSF1 Ras association (RalGDS/AF-6) domain family member 1 0.245323
SAV1 salvador family WW domain containing protein 1 0.243879
KIFC3 kinesin family member C3 0.242437
NUP50 nucleoporin 50kDa 0.242437
PANK1 pantothenate kinase 1 0.238478
MAP9 microtubule-associated protein 9 0.23776
TADA3 transcriptional adaptor 3 0.232744
KRIT1 KRIT1, ankyrin repeat containing 0.232029
SEH1L SEH1-like (S. cerevisiae) 0.231672
HDAC5 histone deacetylase 5 0.226331
SPG20 spastic paraplegia 20 (Troyer syndrome) 0.226331
COPS2 COP9 signalosome subunit 2 0.225976
VILL villin-like 0.225976
SEPT7 septin 7 0.22385
RANBP9 RAN binding protein 9 0.223497
ANXA11 annexin A11 0.222436
AKAP9 A kinase (PRKA) anchor protein 9 0.222436
GIF gastric intrinsic factor (vitamin B synthesis) 0.222083
SH3GL1 SH3-domain GRB2-like 1 0.220673
MAPK14 mitogen-activated protein kinase 14 0.219617
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 0.21681
WWP1 WW domain containing E3 ubiquitin protein ligase 1 0.214714
SEPT3 septin 3 0.212627
MEGF6 multiple EGF-like-domains 6 0.212627
CYLD cylindromatosis (turban tumor syndrome) 0.210894
IGLV2-8 immunoglobulin lambda variable 2-8 0.210549
CTNND1 catenin (cadherin-associated protein), delta 1 0.209169
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) 0.206082
CLC Charcot-Leyden crystal galectin 0.205399
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.203361
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.202684
ARL3 ADP-ribosylation factor-like 3 0.198991
FLNA filamin A, alpha 0.197662
DCTN1 dynactin 1 0.194371
AURKA aurora kinase A 0.1921
MARK2 MAP/microtubule affinity-regulating kinase 2 0.190814
CCDC88A coiled-coil domain containing 88A 0.189539
HES1 hes family bHLH transcription factor 1 0.188905
APITD1 apoptosis-inducing, TAF9-like domain 1 0.188274
RND2 Rho family GTPase 2 0.18702
STK3 serine/threonine kinase 3 0.18702
PKP3 plakophilin 3 0.181823
GMNN geminin, DNA replication inhibitor 0.178588
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.178299
SRI sorcin 0.177439
SVIL supervillin 0.177154
RGS14 regulator of G-protein signaling 14 0.172201
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11 0.172201
RPGRIP1L RPGRIP1-like 0.170629
FLCN folliculin 0.170371
RAB11A RAB11A, member RAS oncogene family 0.169859
PBK PDZ binding kinase 0.169099
SHD Src homology 2 domain containing transforming protein D 0.168101
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.166405
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.166405
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.166167
GAS1 growth arrest-specific 1 0.165463
PROM1 prominin 1 0.165463
STK26 serine/threonine protein kinase 26 0.165
PSG9 pregnancy specific beta-1-glycoprotein 9 0.16477
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.164315
TMSB10 thymosin beta 10 0.162763
CLIC4 chloride intracellular channel 4 0.162546
SGTA small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha 0.159462
H3F3C H3 histone, family 3C 0.158502
RAB11B RAB11B, member RAS oncogene family 0.158315
FMN1 formin 1 0.157218