mesenteric lymph node Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Nodes that lie at the root of the mesentery, receiving lymph from parts of the small intestine, cecum, appendix, and large intestine; they comprise three groups: the juxtaintestinal, central superior, and inferior mesenteric lymph nodes. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000767)
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Genes

254 proteins co-occuring with the tissue mesenteric lymph node in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
CD79A CD79a molecule, immunoglobulin-associated alpha 2.44445
CD4 CD4 molecule 2.36145
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) 2.03107
FOXP3 forkhead box P3 1.92215
MADCAM1 mucosal vascular addressin cell adhesion molecule 1 1.70644
IL4 interleukin 4 1.40938
IL10 interleukin 10 1.39697
IL2 interleukin 2 1.37819
TNF tumor necrosis factor 1.37316
IGHV1-2 immunoglobulin heavy variable 1-2 1.32461
CCL25 chemokine (C-C motif) ligand 25 1.32055
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 1.24565
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 1.24476
SELL selectin L 1.23004
THY1 Thy-1 cell surface antigen 1.21802
CCR7 chemokine (C-C motif) receptor 7 1.20645
TGFB1 transforming growth factor, beta 1 1.17846
CD86 CD86 molecule 1.1687
IPP intracisternal A particle-promoted polypeptide 1.139
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3) 1.10137
NELFCD negative elongation factor complex member C/D 1.09253
MPO myeloperoxidase 1.08501
LTB lymphotoxin beta (TNF superfamily, member 3) 1.08148
TLR4 toll-like receptor 4 1.07044
CD5 CD5 molecule 1.05941
IL5 interleukin 5 1.04093
IL1B interleukin 1, beta 0.974149
CD40 CD40 molecule, TNF receptor superfamily member 5 0.964631
TLR2 toll-like receptor 2 0.960312
CTLA4 cytotoxic T-lymphocyte-associated protein 4 0.952978
IL6 interleukin 6 0.944796
RAG2 recombination activating gene 2 0.927192
CD69 CD69 molecule 0.923339
GIMAP5 GTPase, IMAP family member 5 0.914788
ALB albumin 0.905404
TRAC T cell receptor alpha constant 0.898595
CD44 CD44 molecule (Indian blood group) 0.89477
CD80 CD80 molecule 0.885438
CD19 CD19 molecule 0.881627
GLS glutaminase 0.879089
GLYCAM1 glycosylation dependent cell adhesion molecule 1 (pseudogene) 0.868951
TLR5 toll-like receptor 5 0.827778
SIRPA signal-regulatory protein alpha 0.82736
GLS2 glutaminase 2 (liver, mitochondrial) 0.821502
CCR6 chemokine (C-C motif) receptor 6 0.808551
IL17A interleukin 17A 0.804796
TLR9 toll-like receptor 9 0.781063
TBX21 T-box 21 0.780232
PIGR polymeric immunoglobulin receptor 0.779401
ITLN2 intelectin 2 0.778155
RGL1 ral guanine nucleotide dissociation stimulator-like 1 0.775664
MYD88 myeloid differentiation primary response 88 0.767368
GIMAP4 GTPase, IMAP family member 4 0.766539
PTPRC protein tyrosine phosphatase, receptor type, C 0.765296
PIGK phosphatidylinositol glycan anchor biosynthesis, class K 0.750818
CD276 CD276 molecule 0.746689
CSN1S1 casein alpha s1 0.740915
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 0.738442
CXCR3 chemokine (C-X-C motif) receptor 3 0.724041
NOD2 nucleotide-binding oligomerization domain containing 2 0.694128
CS citrate synthase 0.694128
GIMAP1 GTPase, IMAP family member 1 0.686368
PRNP prion protein 0.679025
TSPO translocator protein (18kDa) 0.67495
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.673321
CCL21 chemokine (C-C motif) ligand 21 0.651371
CX3CR1 chemokine (C-X3-C motif) receptor 1 0.648938
LY75 lymphocyte antigen 75 0.648532
TK1 thymidine kinase 1, soluble 0.639214
BAG5 BCL2-associated athanogene 5 0.63274
CD8A CD8a molecule 0.628293
GIMAP6 GTPase, IMAP family member 6 0.625061
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.623446
CD1D CD1d molecule 0.620621
GIMAP7 GTPase, IMAP family member 7 0.615377
LTA lymphotoxin alpha 0.610943
HLA-B major histocompatibility complex, class I, B 0.601283
ICAM1 intercellular adhesion molecule 1 0.599273
CD68 CD68 molecule 0.598469
RAG1 recombination activating gene 1 0.590437
IL27RA interleukin 27 receptor, alpha 0.586026
REG3G regenerating islet-derived 3 gamma 0.585625
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) 0.584823
CCL19 chemokine (C-C motif) ligand 19 0.58282
GATA3 GATA binding protein 3 0.581618
TSLP thymic stromal lymphopoietin 0.574017
FUT7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) 0.573217
DNTT DNA nucleotidylexotransferase 0.567227
ALYREF Aly/REF export factor 0.563637
CXCL10 chemokine (C-X-C motif) ligand 10 0.559652
GIMAP8 GTPase, IMAP family member 8 0.558457
CXCR5 chemokine (C-X-C motif) receptor 5 0.558059
OCLN occludin 0.554876
SH3GL1 SH3-domain GRB2-like 1 0.536625
G6PD glucose-6-phosphate dehydrogenase 0.520829
CCL22 chemokine (C-C motif) ligand 22 0.516497
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 0.510206
AFF2 AF4/FMR2 family, member 2 0.507064
RTP1 receptor (chemosensory) transporter protein 1 0.499615
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.495701
LYZ lysozyme 0.494918
PID1 phosphotyrosine interaction domain containing 1 0.494528
CCR3 chemokine (C-C motif) receptor 3 0.491791
CD3E CD3e molecule, epsilon (CD3-TCR complex) 0.4914
IGIP IgA-inducing protein 0.485935
ANGPTL4 angiopoietin-like 4 0.484376
CCL20 chemokine (C-C motif) ligand 20 0.483986
BATF3 basic leucine zipper transcription factor, ATF-like 3 0.483986
SOD2 superoxide dismutase 2, mitochondrial 0.482038
PHB2 prohibitin 2 0.479702
HSPH1 heat shock 105kDa/110kDa protein 1 0.477367
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.470375
ALPPL2 alkaline phosphatase, placental-like 2 0.469211
ALPL alkaline phosphatase, liver/bone/kidney 0.468436
TJP1 tight junction protein 1 0.468048
ALPP alkaline phosphatase, placental 0.46766
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.462626
IL1A interleukin 1, alpha 0.461078
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.458373
OR10A4 olfactory receptor, family 10, subfamily A, member 4 0.454898
IL3 interleukin 3 0.445653
GPX5 glutathione peroxidase 5 0.444115
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble 0.441426
GPX4 glutathione peroxidase 4 0.440274
DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 0.440274
CD207 CD207 molecule, langerin 0.435672
SELP selectin P (granule membrane protein 140kDa, antigen CD62) 0.432991
GPX1 glutathione peroxidase 1 0.428783
RPS19BP1 ribosomal protein S19 binding protein 1 0.428018
TLR1 toll-like receptor 1 0.42649
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.412011
VCAM1 vascular cell adhesion molecule 1 0.409731
CD79B CD79b molecule, immunoglobulin-associated beta 0.408592
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene 0.407073
SH2D3C SH2 domain containing 3C 0.407073
PIH2 pregnancy-induced hypertension syndrome-related protein 0.405176
IL7R interleukin 7 receptor 0.398735
IL13 interleukin 13 0.394197
AHR aryl hydrocarbon receptor 0.391931
ACTA1 actin, alpha 1, skeletal muscle 0.388912
LTF lactotransferrin 0.388535
PTBP2 polypyrimidine tract binding protein 2 0.387404
TNFRSF18 tumor necrosis factor receptor superfamily, member 18 0.380627
IL25 interleukin 25 0.377245
PGLYRP4 peptidoglycan recognition protein 4 0.369747
CD47 CD47 molecule 0.367502
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.366754
BTNL2 butyrophilin-like 2 0.366381
PIGB phosphatidylinositol glycan anchor biosynthesis, class B 0.363393
THAP3 THAP domain containing, apoptosis associated protein 3 0.361901
IL12A interleukin 12A 0.357802
CXCR6 chemokine (C-X-C motif) receptor 6 0.355198
TREM1 triggering receptor expressed on myeloid cells 1 0.347038
STAB2 stabilin 2 0.344079
SST somatostatin 0.342971
IL2RA interleukin 2 receptor, alpha 0.340019
SDCBP syndecan binding protein (syntenin) 0.339282
INS insulin 0.3356
CXCL9 chemokine (C-X-C motif) ligand 9 0.334498
IL23A interleukin 23, alpha subunit p19 0.332661
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.330094
LONP1 lon peptidase 1, mitochondrial 0.328628
GJB6 gap junction protein, beta 6, 30kDa 0.32497
SPRR2A small proline-rich protein 2A 0.32132
IFNG interferon, gamma 0.320591
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.31877
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 0.315861
CCL2 chemokine (C-C motif) ligand 2 0.313683
IGLV9-49 immunoglobulin lambda variable 9-49 0.309697
ICOSLG inducible T-cell co-stimulator ligand 0.308974
CDH3 cadherin 3, type 1, P-cadherin (placental) 0.306444
CNR2 cannabinoid receptor 2 (macrophage) 0.304279
NVL nuclear VCP-like 0.302478
CCR9 chemokine (C-C motif) receptor 9 0.297806
ARMC9 armadillo repeat containing 9 0.295655
IL12B interleukin 12B 0.294223
AICDA activation-induced cytidine deaminase 0.293866
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 0.293151
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.289939
CALCOCO2 calcium binding and coiled-coil domain 2 0.287447
HK1 hexokinase 1 0.285671
GCG glucagon 0.284253
GBP2 guanylate binding protein 2, interferon-inducible 0.283899
STAT1 signal transducer and activator of transcription 1, 91kDa 0.276495
DEFA4 defensin, alpha 4, corticostatin 0.274744
CRP C-reactive protein, pentraxin-related 0.273696
TMX1 thioredoxin-related transmembrane protein 1 0.271604
CD8B CD8b molecule 0.269867
MUC2 mucin 2, oligomeric mucus/gel-forming 0.269521
DAPK2 death-associated protein kinase 2 0.266757
CCL17 chemokine (C-C motif) ligand 17 0.264353
VIP vasoactive intestinal peptide 0.262304
EDA ectodysplasin A 0.260267
ACAT1 acetyl-CoA acetyltransferase 1 0.258917
NKX2-3 NK2 homeobox 3 0.258917
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.257572
MBP myelin basic protein 0.254902
TCHH trichohyalin 0.251279
PIGG phosphatidylinositol glycan anchor biosynthesis, class G 0.250953
NLRP10 NLR family, pyrin domain containing 10 0.249653
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 0.249006
CRTAM cytotoxic and regulatory T cell molecule 0.247079
MPEG1 macrophage expressed 1 0.245491
BIN3 bridging integrator 3 0.245175
CD40LG CD40 ligand 0.24486
FTL ferritin, light polypeptide 0.244545
IL17F interleukin 17F 0.243918
IFNA1 interferon, alpha 1 0.242363
CD83 CD83 molecule 0.240826
NT5E 5'-nucleotidase, ecto (CD73) 0.239913
IL1R1 interleukin 1 receptor, type I 0.239913
FCRL4 Fc receptor-like 4 0.239007
FLT3LG fms-related tyrosine kinase 3 ligand 0.239007
FTH1 ferritin, heavy polypeptide 1 0.238706
STAT4 signal transducer and activator of transcription 4 0.238706
COL13A1 collagen, type XIII, alpha 1 0.238108
CR1 complement component (3b/4b) receptor 1 (Knops blood group) 0.236921
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 0.236627
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.235748
PRF1 perforin 1 (pore forming protein) 0.234878
IFNAR1 interferon (alpha, beta and omega) receptor 1 0.23459
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 0.233731
PACSIN1 protein kinase C and casein kinase substrate in neurons 1 0.233731
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 0.230931
RYR2 ryanodine receptor 2 (cardiac) 0.23011
PIGA phosphatidylinositol glycan anchor biosynthesis, class A 0.229299
MARK1 MAP/microtubule affinity-regulating kinase 1 0.229032
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1 0.228764
SIGLEC10 sialic acid binding Ig-like lectin 10 0.228497
EMCN endomucin 0.228497
SPON2 spondin 2, extracellular matrix protein 0.22797
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.22797
LCK LCK proto-oncogene, Src family tyrosine kinase 0.227186
POFUT1 protein O-fucosyltransferase 1 0.226411
LRRC32 leucine rich repeat containing 32 0.225395
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 0.223906
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 0.223419
INSM2 insulinoma-associated 2 0.222699
DEFA1B defensin, alpha 1B 0.220831
CCL1 chemokine (C-C motif) ligand 1 0.220604
CD300A CD300a molecule 0.220378
PGLYRP3 peptidoglycan recognition protein 3 0.219707
CDSN corneodesmosin 0.219047
PPARG peroxisome proliferator-activated receptor gamma 0.218398
ACKR3 atypical chemokine receptor 3 0.217974
RORC RAR-related orphan receptor C 0.217139
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4 0.21673
CD24 CD24 molecule 0.216325
ADA adenosine deaminase 0.215928
H1FX H1 histone family, member X 0.215928
FABP1 fatty acid binding protein 1, liver 0.215534
DEFA1 defensin, alpha 1 0.212761
CEMP1 cementum protein 1 0.212586
KLRB1 killer cell lectin-like receptor subfamily B, member 1 0.212413