menstrual irregularities Gene Set

Dataset GWASdb SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/HP:0000858
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Genes

85 genes associated with the menstrual irregularities phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
MCM8 minichromosome maintenance complex component 8 2.54132
TMEM150B transmembrane protein 150B 2.22515
UIMC1 ubiquitin interaction motif containing 1 2.05864
BRSK1 BR serine/threonine kinase 1 1.72796
PRIM1 primase, DNA, polypeptide 1 (49kDa) 1.38418
HELQ helicase, POLQ-like 1.38418
SYCP2L synaptonemal complex protein 2-like 1.37153
RHBDL2 rhomboid, veinlet-like 2 (Drosophila) 1.25001
PRRC2A proline-rich coiled-coil 2A 1.2331
LIN28B lin-28 homolog B (C. elegans) 1.21853
ZNF483 zinc finger protein 483 1.17797
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila) 1.15548
TLK1 tousled-like kinase 1 1.14116
RXRG retinoid X receptor, gamma 1.1097
SKOR2 SKI family transcriptional corepressor 2 1.09351
POLG polymerase (DNA directed), gamma 1.07403
FNDC4 fibronectin type III domain containing 4 1.02229
CCDC85A coiled-coil domain containing 85A 0.844241
TDRD3 tudor domain containing 3 0.844241
EXO1 exonuclease 1 0.733286
NLRP11 NLR family, pyrin domain containing 11 0.726078
CRTC1 CREB regulated transcription coactivator 1 0.60335
GAB2 GRB2-associated binding protein 2 0.584959
TRIM66 tripartite motif containing 66 0.572823
BEGAIN brain-enriched guanylate kinase-associated 0.572823
RBM6 RNA binding motif protein 6 0.542759
METAP1D methionyl aminopeptidase type 1D (mitochondrial) 0.531556
KLHDC8B kelch domain containing 8B 0.530444
FTO fat mass and obesity associated 0.530444
NUSAP1 nucleolar and spindle associated protein 1 0.515847
KDM3B lysine (K)-specific demethylase 3B 0.515847
PHF21A PHD finger protein 21A 0.510576
KPNA3 karyopherin alpha 3 (importin alpha 4) 0.498792
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific 0.495598
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.495598
OLFM2 olfactomedin 2 0.474018
LRP1B low density lipoprotein receptor-related protein 1B 0.474018
BANP BTG3 associated nuclear protein 0.474018
PNP purine nucleoside phosphorylase 0.463959
ECE2 endothelin converting enzyme 2 0.4604
ADGRA2 adhesion G protein-coupled receptor A2 0.4604
SLC14A2 solute carrier family 14 (urea transporter), member 2 0.4604
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1 0.450694
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.443745
SLC44A4 solute carrier family 44, member 4 0.443208
TLE4 transducin-like enhancer of split 4 0.440291
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.433116
RORA RAR-related orphan receptor A 0.429354
TACR3 tachykinin receptor 3 0.424122
TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 0.414241
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 0.413807
KIRREL3 kin of IRRE like 3 (Drosophila) 0.413807
FLJ32955 0.413807
IQCH IQ motif containing H 0.413807
DSCAML1 Down syndrome cell adhesion molecule like 1 0.410331
UNC13C unc-13 homolog C (C. elegans) 0.410331
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.410331
HTR4 5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 0.40908
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.408206
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.406588
ZFHX4 zinc finger homeobox 4 0.406588
ANTXR1 anthrax toxin receptor 1 0.405515
RNF44 ring finger protein 44 0.405267
NKX2-1 NK2 homeobox 1 0.40409
BANK1 B-cell scaffold protein with ankyrin repeats 1 0.401195
VCAN versican 0.40066
MYO16 myosin XVI 0.400228
DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 0.400021
DLGAP2 discs, large (Drosophila) homolog-associated protein 2 0.400021
PRDM5 PR domain containing 5 0.398533
FAM159A family with sequence similarity 159, member A 0.393645
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.392019
NCKAP5 NCK-associated protein 5 0.389366
DAZAP1 DAZ associated protein 1 0.388393
LRRC41 leucine rich repeat containing 41 0.386356
PADI2 peptidyl arginine deiminase, type II 0.379115
MCTP1 multiple C2 domains, transmembrane 1 0.377334
NDUFA11 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 0.367065
ZRANB2-AS2 ZRANB2 antisense RNA 2 (head to head) 0.364969
PARK2 parkin RBR E3 ubiquitin protein ligase 0.364458
WRN Werner syndrome, RecQ helicase-like 0.361157
ARHGAP22 Rho GTPase activating protein 22 0.360784
PRIMPOL primase and polymerase (DNA-directed) 0.355929
PRPF31 pre-mRNA processing factor 31 0.351606
EGF epidermal growth factor 0.345607