mda-mb-435 cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Human breast cancer cell line that expresses high levels of seprase as do the carcinoma cells in tumors of human breast cancer patients. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001567)
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Genes

137 proteins co-occuring with the tissue mda-mb-435 cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
LIMD1 LIM domains containing 1 1.35268
PSMB6 proteasome (prosome, macropain) subunit, beta type, 6 1.28188
TRIP6 thyroid hormone receptor interactor 6 1.1758
AJUBA ajuba LIM protein 1.13147
ICAM4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 1.04533
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) 1.0339
ADAM23 ADAM metallopeptidase domain 23 1.01287
TYRP1 tyrosinase-related protein 1 0.993684
DLC1 DLC1 Rho GTPase activating protein 0.945226
WTIP Wilms tumor 1 interacting protein 0.937917
ICAM5 intercellular adhesion molecule 5, telencephalin 0.903701
ADAM28 ADAM metallopeptidase domain 28 0.876974
ESR1 estrogen receptor 1 0.79146
ZYX zyxin 0.728563
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 0.683919
LPP LIM domain containing preferred translocation partner in lipoma 0.65543
CDH13 cadherin 13 0.641238
MMP9 matrix metallopeptidase 9 0.640428
PTTG1 pituitary tumor-transforming 1 0.580017
CD82 CD82 molecule 0.572418
TOP1 topoisomerase (DNA) I 0.556865
PHB prohibitin 0.535438
CRK v-crk avian sarcoma virus CT10 oncogene homolog 0.525166
FANCF Fanconi anemia, complementation group F 0.52142
JAG2 jagged 2 0.518072
ERBB2 erb-b2 receptor tyrosine kinase 2 0.511778
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3 0.499615
SLC39A10 solute carrier family 39 (zinc transporter), member 10 0.446614
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 0.432034
FN1 fibronectin 1 0.416576
MMP2 matrix metallopeptidase 2 0.41087
ESR2 estrogen receptor 2 (ER beta) 0.410491
MITF microphthalmia-associated transcription factor 0.409351
HPSE heparanase 0.395331
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.387781
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.381755
MAP2K5 mitogen-activated protein kinase kinase 5 0.37856
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 0.367502
STOML2 stomatin (EPB72)-like 2 0.36246
PMEL premelanosome protein 0.357058
LDHA lactate dehydrogenase A 0.351485
PLK1 polo-like kinase 1 0.32753
RFK riboflavin kinase 0.318952
MLANA melan-A 0.312232
EPOR erythropoietin receptor 0.308251
KAT7 K(lysine) acetyltransferase 7 0.304099
FOXO1 forkhead box O1 0.302478
COL18A1 collagen, type XVIII, alpha 1 0.291722
CST6 cystatin E/M 0.288336
TPCN1 two pore segment channel 1 0.278076
THBS1 thrombospondin 1 0.272997
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.270561
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 0.270214
PSPH phosphoserine phosphatase 0.269521
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 0.25858
GLDC glycine dehydrogenase (decarboxylating) 0.257907
VDAC2 voltage-dependent anion channel 2 0.25259
F2R coagulation factor II (thrombin) receptor 0.24052
STYK1 serine/threonine/tyrosine kinase 1 0.239761
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.239007
DPYD dihydropyrimidine dehydrogenase 0.233021
PSAT1 phosphoserine aminotransferase 1 0.227707
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.220265
CCNB1 cyclin B1 0.218613
CA10 carbonic anhydrase X 0.218186
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 0.215147
PRSS8 protease, serine, 8 0.214482
IGLV2-14 immunoglobulin lambda variable 2-14 0.212936
COL4A1 collagen, type IV, alpha 1 0.208813
S100A10 S100 calcium binding protein A10 0.207464
SPP1 secreted phosphoprotein 1 0.2074
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2 0.203474
SNAI2 snail family zinc finger 2 0.203431
PBK PDZ binding kinase 0.202896
DHODH dihydroorotate dehydrogenase (quinone) 0.202701
ANXA2 annexin A2 0.202185
FABP7 fatty acid binding protein 7, brain 0.201944
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5 0.201648
PDIA3 protein disulfide isomerase family A, member 3 0.201616
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.201553
VDAC1 voltage-dependent anion channel 1 0.200773
TIAM1 T-cell lymphoma invasion and metastasis 1 0.200617
TOX thymocyte selection-associated high mobility group box 0.200275
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.200159
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.200159
SNAI1 snail family zinc finger 1 0.199732
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3 0.199595
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.198831
TSC1 tuberous sclerosis 1 0.198786
NR1H3 nuclear receptor subfamily 1, group H, member 3 0.198727
ARNT aryl hydrocarbon receptor nuclear translocator 0.198079
KCNJ12 potassium channel, inwardly rectifying subfamily J, member 12 0.197658
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.197471
TXNIP thioredoxin interacting protein 0.197249
PHGDH phosphoglycerate dehydrogenase 0.197249
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1 0.197032
FRZB frizzled-related protein 0.196826
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.19651
CXCL16 chemokine (C-X-C motif) ligand 16 0.19632
CST4 cystatin S 0.196279
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.196198
ORAI1 ORAI calcium release-activated calcium modulator 1 0.196198
ZEB2 zinc finger E-box binding homeobox 2 0.196095
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) 0.195991
KISS1R KISS1 receptor 0.195704
EGFR epidermal growth factor receptor 0.195563
KISS1 KiSS-1 metastasis-suppressor 0.19534
BAX BCL2-associated X protein 0.194957
NME1-NME2 NME1-NME2 readthrough 0.194909
ECE1 endothelin converting enzyme 1 0.194813
ATM ATM serine/threonine kinase 0.194654
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.194604
EPHA2 EPH receptor A2 0.194592
AURKB aurora kinase B 0.194466
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) 0.194441
TWIST1 twist family bHLH transcription factor 1 0.194274
SFRP1 secreted frizzled-related protein 1 0.194183
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.19393
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.193656
MUT methylmalonyl CoA mutase 0.19353
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.193271
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.19302
FLT4 fms-related tyrosine kinase 4 0.19299
CSK c-src tyrosine kinase 0.192622
PAX8 paired box 8 0.192385
CD44 CD44 molecule (Indian blood group) 0.192207
BIRC5 baculoviral IAP repeat containing 5 0.191791
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.191654
ENO1 enolase 1, (alpha) 0.191636
KAT5 K(lysine) acetyltransferase 5 0.191497
MMP12 matrix metallopeptidase 12 0.191086
ZEB1 zinc finger E-box binding homeobox 1 0.190752
LALBA lactalbumin, alpha- 0.190543
MX1 MX dynamin-like GTPase 1 0.190291
CXCL12 chemokine (C-X-C motif) ligand 12 0.189971
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.189951
BRCA1 breast cancer 1, early onset 0.189931