matter Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

186 genes co-occuring with the biological term matter in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ACE angiotensin I converting enzyme
ADAM12 ADAM metallopeptidase domain 12
ADAM17 ADAM metallopeptidase domain 17
ADRB2 adrenoceptor beta 2, surface
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AGTR1 angiotensin II receptor, type 1
AHSG alpha-2-HS-glycoprotein
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
ARG2 arginase 2
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ATXN7 ataxin 7
BAK1 BCL2-antagonist/killer 1
BCHE butyrylcholinesterase
BCL2 B-cell CLL/lymphoma 2
BCL2L1 BCL2-like 1
BDNF brain-derived neurotrophic factor
C5 complement component 5
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit
CASP1 caspase 1, apoptosis-related cysteine peptidase
CAT catalase
CAV1 caveolin 1, caveolae protein, 22kDa
CCL2 chemokine (C-C motif) ligand 2
CCL20 chemokine (C-C motif) ligand 20
CD163 CD163 molecule
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CETP cholesteryl ester transfer protein, plasma
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CHRNA5 cholinergic receptor, nicotinic, alpha 5 (neuronal)
CKB creatine kinase, brain
CLU clusterin
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CNR1 cannabinoid receptor 1 (brain)
COL4A1 collagen, type IV, alpha 1
COMT catechol-O-methyltransferase
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRP C-reactive protein, pentraxin-related
CSPG4 chondroitin sulfate proteoglycan 4
CST3 cystatin C
CXCL8 chemokine (C-X-C motif) ligand 8
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1
DAOA D-amino acid oxidase activator
DCDC2 doublecortin domain containing 2
DCX doublecortin
DEAF1 DEAF1 transcription factor
DISC1 disrupted in schizophrenia 1
DLGAP2 discs, large (Drosophila) homolog-associated protein 2
DRD2 dopamine receptor D2
DRD3 dopamine receptor D3
DRD4 dopamine receptor D4
DTNBP1 dystrobrevin binding protein 1
DYX1C1 dyslexia susceptibility 1 candidate 1
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
ERBB4 erb-b2 receptor tyrosine kinase 4
ESR1 estrogen receptor 1
F2R coagulation factor II (thrombin) receptor
F2RL1 coagulation factor II (thrombin) receptor-like 1
FA2H fatty acid 2-hydroxylase
FLNA filamin A, alpha
FMR1 fragile X mental retardation 1
FOXP2 forkhead box P2
GBA glucosidase, beta, acid
GBE1 glucan (1,4-alpha-), branching enzyme 1
GCG glucagon
GFAP glial fibrillary acidic protein
GJC3 gap junction protein, gamma 3, 30.2kDa
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GRID1 glutamate receptor, ionotropic, delta 1
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B
GRN granulin
GSK3B glycogen synthase kinase 3 beta
GSTM1 glutathione S-transferase mu 1
GSTP1 glutathione S-transferase pi 1
GSTT1 glutathione S-transferase theta 1
HFE hemochromatosis
HLA-E major histocompatibility complex, class I, E
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
ICAM1 intercellular adhesion molecule 1
IGF1R insulin-like growth factor 1 receptor
IL1B interleukin 1, beta
IL2 interleukin 2
IL6 interleukin 6
KIAA0319 KIAA0319
KLC1 kinesin light chain 1
L1CAM L1 cell adhesion molecule
LAMA1 laminin, alpha 1
LRRK2 leucine-rich repeat kinase 2
MAG myelin associated glycoprotein
MAOA monoamine oxidase A
MAP1LC3A microtubule-associated protein 1 light chain 3 alpha
MAPK1 mitogen-activated protein kinase 1
MAPK3 mitogen-activated protein kinase 3
MAPT microtubule-associated protein tau
MBP myelin basic protein
MIR137 microRNA 137
MKI67 marker of proliferation Ki-67
MMP2 matrix metallopeptidase 2
MOBP myelin-associated oligodendrocyte basic protein
MOG myelin oligodendrocyte glycoprotein
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MUC5AC mucin 5AC, oligomeric mucus/gel-forming
NAT8L N-acetyltransferase 8-like (GCN5-related, putative)
NEFL neurofilament, light polypeptide
NFIA nuclear factor I/A
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOTCH3 notch 3
NPPB natriuretic peptide B
NPY neuropeptide Y
NR1D1 nuclear receptor subfamily 1, group D, member 1
NRG1 neuregulin 1
NRGN neurogranin (protein kinase C substrate, RC3)
NTRK1 neurotrophic tyrosine kinase, receptor, type 1
NTRK2 neurotrophic tyrosine kinase, receptor, type 2
NTRK3 neurotrophic tyrosine kinase, receptor, type 3
OLIG2 oligodendrocyte lineage transcription factor 2
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PARK2 parkin RBR E3 ubiquitin protein ligase
PCM1 pericentriolar material 1
PHB prohibitin
PINK1 PTEN induced putative kinase 1
PLAT plasminogen activator, tissue
PLP1 proteolipid protein 1
PLXNB3 plexin B3
PON1 paraoxonase 1
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRDX5 peroxiredoxin 5
PRNP prion protein
PROS1 protein S (alpha)
PSEN1 presenilin 1
PTAFR platelet-activating factor receptor
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PYY peptide YY
RAB6A RAB6A, member RAS oncogene family
RELN reelin
RGS4 regulator of G-protein signaling 4
RTN4R reticulon 4 receptor
S1PR1 sphingosine-1-phosphate receptor 1
SAMHD1 SAM domain and HD domain 1
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin)
SCN1A sodium channel, voltage gated, type I alpha subunit
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
SGCE sarcoglycan, epsilon
SHH sonic hedgehog
SIRT3 sirtuin 3
SIRT5 sirtuin 5
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SOD1 superoxide dismutase 1, soluble
SOD2 superoxide dismutase 2, mitochondrial
SOX17 SRY (sex determining region Y)-box 17
SPG11 spastic paraplegia 11 (autosomal recessive)
SPTAN1 spectrin, alpha, non-erythrocytic 1
STS steroid sulfatase (microsomal), isozyme S
SUMF1 sulfatase modifying factor 1
SYNM synemin, intermediate filament protein
TARDBP TAR DNA binding protein
TBCE tubulin folding cofactor E
TF transferrin
TGFB1 transforming growth factor, beta 1
TLR3 toll-like receptor 3
TM4SF20 transmembrane 4 L six family member 20
TMEM132D transmembrane protein 132D
TNF tumor necrosis factor
TP53 tumor protein p53
TPH2 tryptophan hydroxylase 2
TRPM2 transient receptor potential cation channel, subfamily M, member 2
TRPV1 transient receptor potential cation channel, subfamily V, member 1
TTR transthyretin
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VEGFA vascular endothelial growth factor A
WWC1 WW and C2 domain containing 1
ZNF804A zinc finger protein 804A